Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0024154PREDICTED: upstream activation factor subunit spp27-like isoform X3 [Nicotiana sylvestris]Chr3+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG10G4470LG-10-View
Acer truncatumAtru.chr5.2817chr5-View
Acer truncatumAtru.chr3.426chr3-View
Actinidia chinensisActinidia17847Lachesis_group7-View
Arabidopsis lyrataAL1G56870scaffold_1+View
Arabidopsis lyrataAL3G32450scaffold_3+View
Avicennia marinaMSTRG.23778ScioBoG_3895_HRSCAF_3912-View
Aquilegia oxysepalaAqoxy6G00892CHR06-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.CVNS8PPTHR13844:SF4 - PROTEIN K03B8.4-RELATEDarahy.Tifrunner.gnm1.Arahy.15-View
Arabidopsis thalianaAT1G49520SWIB complex BAF60b domain-containing protein SWIB complex BAF60b domain-containing protein%3B CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain (InterPro:IPR003121)%2C SWIB domain (InterPro:IPR019835)%2C DEK%2C C-terminal (InterPro:IPR014876)%3B BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing protein (TAIR:AT3G19080.1)%3B Has 3197 Blast hits to 1975 proteins in 305 species: Archae - 0%3B Bacteria - 439%3B Metazoa - 696%3B Fungi - 468%3B Plants - 732%3B Viruses - 19%3B Other Eukaryotes - 843 (source: NCBI BLink).Chr1+View
Brassica napusA03p41000A03+View
Brassica napusA05p30540A05-View
Brassica rapaBraA05t21892ZA05-View
Beta vulgarisEL10Ac9g21819PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDChr9_EL10_PGA_scaffold8+View
Capsicum annuumCAN.G322.36PGAv.1.6.scaffold322-View
Cannabis sativaCANSAT01G2960NC_044373.1-View
Coffea canephoraCc07_g05720Putative Upstream activation factor subunit spp27chr7+View
Coffea canephoraCc02_g18450Putative Upstream activation factor subunit spp27chr2+View
Citrus clementinaCiclev10028659m.gscaffold_8-View
Citrus clementinaCiclev10026010m.gscaffold_7+View
Cardamine hirsutaCARHR039550SWIB/MDM2 domain containing proteinChr1+View
Carya illinoinensisCiPaw.02G010400PTHR13844//PTHR13844:SF4 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // PROTEIN K03B8.4-RELATEDChr02-View
Corchorus olitoriusCOL.COLO4_11723hypothetical proteinAWUE01014740.1-View
Carica papayaCpa.g.sc62.52supercontig_62-View
Chenopodium quinoaAUR62016635spp27: Upstream activation factor subunit spp27C_Quinoa_Scaffold_3670-View
Chenopodium quinoaAUR62011425spp27: Upstream activation factor subunit spp27C_Quinoa_Scaffold_3333+View
Capsella rubellaCarub.0001s3871PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDscaffold_1+View
Daucus carotaDCAR_010925hypothetical proteinDCARv2_Chr3-View
Davidia involucrataDinv39894GWHABJS00000014+View
Durio zibethinusDuzib264G0886NW_019167960.1-View
Durio zibethinusDuzib132G0316NW_019167915.1+View
Erigeron canadensisECA234G2777Conyza_canadensis_scaffold:4+View
Eucalyptus grandisEucgr.I01179Chr09-View
Erythranthe guttataMigut.B00307scaffold_2+View
Erythranthe guttataMigut.H00467scaffold_8-View
Eutrema salsugineumThhalv10020944m.gK15223 - upstream activation factor subunit UAF30 (UAF30, SPP27)scaffold_13-View
Fragaria x ananassaFAN24G0901PTHR13844//PTHR13844:SF4 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // PROTEIN K03B8.4-RELATEDFvb2-2+View
Fragaria x ananassaFAN27G2733PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDFvb2-1-View
Fragaria x ananassaFAN20G0485PTHR13844//PTHR13844:SF4 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // PROTEIN K03B8.4-RELATEDFvb2-3+View
Fragaria vescaFvH4_2g06890PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDFvb2-View
Gossypium hirsutumGohir.A11G189600K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27)A11+View
Gossypium hirsutumGohir.D02G212000K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27)D02+View
Gossypium hirsutumGohir.A03G191000K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27)A03+View
Gossypium hirsutumGohir.D11G196350PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDD11+View
Glycine maxGlyma.11G058700PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDGm11-View
Glycine maxGlyma.01G183600PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDGm01+View
Gossypium raimondiiGorai.007G210300Chr07+View
Gossypium raimondiiGorai.005G239900Chr05+View
Lotus japonicusLj2g0019864PTHR13844//PTHR13844:SF4 - BRG-1 ASSOCIATED FACTOR 60 BAF60 // PROTEIN K03B8.4-RELATEDchr2-View
Lonicera japonicaLj4C138G6GWHAAZE00000004+View
Lactuca sativaLsat_1_v5_gn_5_113480PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDLsat_1_v8_lg_5+View
Magnolia biondiiMBI16_g19912_MAGBIOAED:0.28Chr16-View
Malus domesticaMD10G1089200SWIB complex BAF60b domain-containing proteinChr10+View
Manihot esculentaManes.17G094566Chromosome17-View
Manihot esculentaManes.15G143600Chromosome15-View
Medicago truncatulaMedtr5g018010upstream activation factor subunit UAF30, putativechr5-View
Nicotiana tabacumNitab4.5_0002462g0060SWIB/MDM2 domain, Homeodomain-like, SWIB domain, DEK, C-terminalNitab4.5_0002462-View
Petunia axillarisPeaxi162Scf00016g10154SWIB complex BAF60b domain-containing proteinPeaxi162Scf00016+View
Prunus persicaPrupe.8G116100Pp08+View
Pisum sativumPsat2g164800SWIB/MDM2 domainchr2LG1+View
Papaver somniferumPSO541G1265NC_039363.1+View
Papaver somniferumPSO675G0901NC_039358.1+View
Populus trichocarpaPotri.005G134500K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27)Chr05+View
Populus trichocarpaPotri.007G039350PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDChr07+View
Populus trichocarpaPotri.009G106700PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDChr09-View
Populus trichocarpaPotri.004G145200K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27)Chr04-View
Phaseolus vulgarisPhvul.002G021500PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDChr02-View
Quercus lobataQL06p0427606-View
Quercus lobataQL11p03839911-View
Rosa chinensisRcHm_v2.0_Chr6g0259201RcHm_v2.0_Chr6-View
Rhododendron simsiiRhsim08G0104200chr08-View
Rhododendron simsiiRhsim05G0080300chr05+View
Striga asiaticaSGA_v2.0_scaffold58G20605scaffold58+View
Striga asiaticaSGA_v2.0_scaffold15G07245scaffold15+View
Salix brachistaSabra04G0096200GWHAAZH00000004-View
Salix brachistaSabra09G0081500GWHAAZH00000009-View
Sechium eduleSed0023407LG05-View
Solanum lycopersicumSolyc01g108290.3SWIB/MDM2 domain containing protein (AHRD V3.3 *** B6SZA4_MAIZE)SL4.0ch01+View
Schrenkiella parvulaSp3g17160PTHR13844:SF4 - PROTEIN K03B8.4-RELATEDch3-1+View
Solanum pennelliiSopen01g050510SWIB complex BAF60b domain-containing protein | CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain , SWIB domain , DEK, C-terminal | BEST Arabidopsis thaliana protein match is: SWIB complex BAF60b domain-containing proteinSpenn-ch01+View
Solanum tuberosumPGSC0003DMG400025800Upstream activation factor subunit UAF30ST4.03ch01+View
Selenicereus undatusHund06188Scaffold_33676-View
Selenicereus undatusHund13580Scaffold_33679-View
Trochodendron aralioidesTAR628G1648group5+View
Trochodendron aralioidesTAR376G0084group14-View
Theobroma cacaoThecc.01G050600SWIB complex BAF60b domain-containing proteinChromosome_1+View
Theobroma cacaoThecc.02G095500SWIB complex BAF60b domain-containing proteinChromosome_2+View
Tripterygium wilfordiiTWI09G1604NC_052245.1+View
Vigna mungoVMungo1215G2818CM024074.1-View
Vitis viniferaGSVIVG01031805001chr3-View
Zea maysZm00001eb058450Zm00001e005782 SWIB complex BAF60b domain-containing protein1+View
Zea maysZm00001eb214210Zm00001e011981 SWIB/MDM2 domain containing protein5-View