Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensisActinidia26891Lachesis_group0+View
Arabidopsis lyrataAL6G47908scaffold_6-View
Arabidopsis lyrataAL2G13670scaffold_2+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.4B0G7FPF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)arahy.Tifrunner.gnm1.Arahy.14+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.W3SGY7PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)arahy.Tifrunner.gnm1.Arahy.04+View
Arabidopsis thalianaAT1G62260mitochondrial editing factor 9 Encodes MITOCHONDRIAL EDITING FACTOR 9 (MEF9)%2C an E subclass PPR protein required for RNA editing. mitochondrial editing factor 9 (MEF9)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: cytidine to uridine editing%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1)%3B Has 48341 Blast hits to 14172 proteins in 260 species: Archae - 3%3B Bacteria - 22%3B Metazoa - 134%3B Fungi - 182%3B Plants - 47365%3B Viruses - 0%3B Other Eukaryotes - 635 (source: NCBI BLink).Chr1-View
Arabidopsis thalianaAT4G04370Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1)%3B Has 51385 Blast hits to 13710 proteins in 213 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 41%3B Fungi - 119%3B Plants - 50626%3B Viruses - 0%3B Other Eukaryotes - 599 (source: NCBI BLink).Chr4-View
Brassica carinataBcaC04g21288ChrC04-View
Brassica napusC09p33520C09+View
Brassica napusA09p26370A09+View
Brassica oleraceaBolC9t56188HC9+View
Brassica rapaBraA09t38211ZA09+View
Beta vulgarisEL10Ac8g20105PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)Chr8_EL10_PGA_scaffold4+View
Capsicum annuumCAN.G1014.29PGAv.1.6.scaffold1014+View
Cannabis sativaCANSAT56G0123NC_044371.1+View
Corylus avellanaHaze_12808Similar to PCMP-E71: Putative pentatricopeptide repeat-containing protein At1g10330 (Arabidopsis thaliana OX%3D3702)5-View
Corylus avellanaHaze_06842Similar to PCMP-E99: Pentatricopeptide repeat-containing protein At4g04370 (Arabidopsis thaliana OX%3D3702)2+View
Coffea canephoraCc05_g03730Putative Ribonuclease S-7chr5-View
Citrus clementinaCiclev10018027m.gscaffold_2+View
Ceratophyllum demersumCDE05G02293+View
Carpinus fangianaCfa014358Cfa06-View
Carpinus fangianaCfa000177Cfa01-View
Cardamine hirsutaCARHR049870Pentatricopeptide repeat-containing protein, putativeChr2+View
Cardamine hirsutaCARHR253080Pentatricopeptide repeat-containing proteinChr8+View
Carya illinoinensisCiPaw.09G096600PF13041 - PPR repeat family (PPR_2)Chr09+View
Carica papayaCpa.g.sc152.44supercontig_152+View
Chenopodium quinoaAUR62012742PCMP-E99: Pentatricopeptide repeat-containing protein At4g04370C_Quinoa_Scaffold_2715+View
Capsella rubellaCarub.0006s3221PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)scaffold_6-View
Capsella rubellaCarub.0002s0275PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)scaffold_2+View
Daucus carotaDCAR_027877hypothetical proteinDCARv2_Chr8+View
Daucus carotaDCAR_028362hypothetical proteinDCARv2_Chr8+View
Daucus carotaDCAR_008177hypothetical proteinDCARv2_Chr2+View
Davidia involucrataDinv20091GWHABJS00000020+View
Davidia involucrataDinv08752GWHABJS00000013-View
Durio zibethinusDuzib235G0261NW_019167982.1+View
Erigeron canadensisECA234G4501Conyza_canadensis_scaffold:4-View
Eucalyptus grandisEucgr.F00725Chr06-View
Erythranthe guttataMigut.H01584scaffold_8+View
Eutrema salsugineumThhalv10023975m.gPF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)scaffold_8+View
Eutrema salsugineumThhalv10028467m.gPF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)scaffold_3+View
Fragaria x ananassaFAN21G2997PF00295//PF01535//PF13041//PF13812 - Glycosyl hydrolases family 28 (Glyco_hydro_28) // PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)Fvb3-2+View
Fragaria x ananassaFAN09G0413PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)Fvb6-2+View
Fragaria x ananassaFAN05G1496PF01535 - PPR repeat (PPR)Fvb6-3+View
Fragaria x ananassaFAN25G3730PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)Fvb3-1+View
Fragaria vescaFvH4_3g01610PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)Fvb3-View
Gossypium hirsutumGohir.D06G156500PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)D06+View
Gossypium hirsutumGohir.D07G191800PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)D07+View
Gossypium hirsutumGohir.A06G150300PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)A06+View
Glycine maxGlyma.09G006400PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)Gm09+View
Glycine maxGlyma.15G110800PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)Gm15+View
Gossypium raimondiiGorai.010G182900Chr10+View
Gossypium raimondiiGorai.001G214700Chr01+View
Lupinus albusLalb_Chr15g0087711PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)Lalb_Chr15-View
Lotus japonicusLj6g0016342PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)chr6+View
Lonicera japonicaLj1P1234T22GWHAAZE00000001+View
Malus domesticaMD10G1325500Tetratricopeptide repeat (TPR)-like superfamily proteinChr10+View
Malus domesticaMD05G1350800Tetratricopeptide repeat (TPR)-like superfamily proteinChr05+View
Medicago truncatulaMedtr2g024080PPR containing plant-like proteinchr2+View
Nelumbo nuciferaNn1g07217chr1+View
Nicotiana tabacumNitab4.5_0001409g0050Pentatricopeptide repeat, Tetratricopeptide-like helicalNitab4.5_0001409+View
Olea europaeaOeu016060.1chr6-View
Petunia axillarisPeaxi162Scf00178g00067Pentatricopeptide repeat-containing proteinPeaxi162Scf00178-View
Prunus persicaPrupe.3G214500PF01535 - PPR repeat (PPR)Pp03-View
Prunus persicaPrupe.4G016600PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)Pp04-View
Pisum sativumPsat4g003760PPR repeat familychr4LG4-View
Pisum sativumPsat1g178040PPR repeat familychr1LG6-View
Phaseolus vulgarisPhvul.006G047700PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)Chr06-View
Phaseolus vulgarisPhvul.006G147000PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)Chr06-View
Quercus lobataQL05p0723125-View
Rosa chinensisRcHm_v2.0_Chr2g0158781RcHm_v2.0_Chr2-View
Rhododendron simsiiRhsim13G0150900chr13+View
Striga asiaticaSGA_v2.0_scaffold89G27477scaffold89+View
Simmondsia chinensisSc05g0009400GWHAASQ00000005+View
Sechium eduleSed0015476LG10-View
Sechium eduleSed0003852LG05+View
Solanum lycopersicumSolyc02g080950.3Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2XFX2_CAPBA)SL4.0ch02+View
Schrenkiella parvulaSp6g04470PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)ch6-1+View
Solanum pennelliiSopen02g025630Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily proteinSpenn-ch02+View
Solanum tuberosumPGSC0003DMG400016465Pentatricopeptide repeat-containing proteinST4.03ch02+View
Trochodendron aralioidesTAR627G0261group6-View
Trifolium pratenseTPR.G13007Tp57577_TGAC_v2_LG7+View
Tripterygium wilfordiiTWI34G0847NC_052235.1+View
Tripterygium wilfordiiTWI63G1215NC_052240.1-View
Tripterygium wilfordiiTWI36G0778NC_052237.1+View
Vigna mungoVMungo0540G0511CM024075.1+View
Vigna mungoVMungo0251G1168CM024069.1-View
Vitis viniferaGSVIVG01012670001chr10-View