Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0044779PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]Chr1-View
CSS0023369PREDICTED: RING-H2 finger protein ATL8 [Vitis vinifera]Chr4+View
CSS0035204PREDICTED: RING-H2 finger protein ATL66-like [Nicotiana sylvestris]Chr4-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG4G6490LG-4+View
Aethionema arabicumAa31LG7G4980LG-7+View
Acer truncatumAtru.chr13.80chr13-View
Actinidia chinensisActinidia28615Lachesis_group27-View
Actinidia chinensisActinidia32991Lachesis_group11+View
Actinidia chinensisActinidia37909Lachesis_group7-View
Arabidopsis lyrataAL2G36520scaffold_2+View
Arabidopsis lyrataAL1G33830scaffold_1+View
Avicennia marinaMSTRG.22088ScioBoG_3008_HRSCAF_3015-View
Avicennia marinaMSTRG.24509ScioBoG_4088_HRSCAF_4107-View
Amaranthus hybridusAh.00g001100RING-H2 finger protein ATL8 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ATL8)AmaHy_arrow1_Contig177_quiver+View
Aquilegia oxysepalaAqoxy6G01564CHR06-View
Aquilegia oxysepalaAqoxy5G00973CHR05-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.U1NS8XPTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.20-View
Arabidopsis thalianaAT1G76410RING/U-box superfamily protein ATL8%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G20823.1)%3B Has 9001 Blast hits to 8977 proteins in 267 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2299%3B Fungi - 634%3B Plants - 4930%3B Viruses - 29%3B Other Eukaryotes - 1109 (source: NCBI BLink).Chr1+View
Arabidopsis thalianaAT1G20823RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G76410.1)%3B Has 9063 Blast hits to 9039 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2341%3B Fungi - 637%3B Plants - 4964%3B Viruses - 26%3B Other Eukaryotes - 1095 (source: NCBI BLink).Chr1+View
Amborella trichopodaATR0807G001AmTr_v1.0_scaffold00044-View
Brassica carinataBcaB07g32075ChrB07+View
Brassica carinataBcaC06g34837ChrC06+View
Brassica carinataBcaC05g25984ChrC05+View
Brassica carinataBcaC08g47139ChrC08+View
Brassica carinataBcaC03g15673ChrC03+View
Brassica carinataBcaB05g24991ChrB05+View
Brassica carinataBcaC08g47253ChrC08-View
Brassica carinataBcaB03g12851ChrB03-View
Brassica napusC05p19370C05+View
Brassica napusA08p29220A08-View
Brassica napusC02p33050C02-View
Brassica napusA07p15470A07-View
Brassica napusA07p42040A07+View
Brassica napusA06p16810A06+View
Brassica napusC06p50610C06+View
Brassica napusC08p20380C08+View
Brassica napusC07p22780C07-View
Brassica oleraceaBolC7t42815HC7-View
Brassica oleraceaBolC5t30640HC5+View
Brassica oleraceaBolC6t40086HC6+View
Brassica oleraceaBolC2t09391HC2+View
Brassica oleraceaBolC8t49667HC8+View
Brassica rapaBraA08t34857ZA08-View
Brassica rapaBraA07t29287ZA07-View
Brassica rapaBraA07t31734ZA07+View
Brassica rapaBraA06t24790ZA06+View
Brassica rapaBraA02t07100ZA02+View
Beta vulgarisEL10Ac1g01893PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr1_EL10_PGA_scaffold3-View
Beta vulgarisEL10Ac9g21538PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATEDChr9_EL10_PGA_scaffold8+View
Cicer arietinum L.Ca_15391_v3Ca_LG5_v3-View
Cicer arietinum L.Ca_24993_v3Ca_LG8_v3+View
Coffea canephoraCc07_g12050RING-H2 finger protein ATL80chr7+View
Citrus clementinaCiclev10004041m.gscaffold_5+View
Carpinus fangianaCfa014125Cfa05+View
Cardamine hirsutaCARHR069970Ring finger proteinChr2+View
Cardamine hirsutaCARHR021250Ring finger proteinChr1+View
Carya illinoinensisCiPaw.08G076500PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr08+View
Carya illinoinensisCiPaw.07G134800PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr07-View
Citrullus lanatusClCG11G018920Ring finger proteinCG_Chr11+View
Cucumis meloMELO3C017047.2RING-H2 finger protein ATL80chr07-View
Carica papayaCpa.g.sc26.150supercontig_26-View
Chenopodium quinoaAUR62003729ATL80: RING-H2 finger protein ATL80C_Quinoa_Scaffold_2370+View
Chenopodium quinoaAUR62013178ATL80: RING-H2 finger protein ATL80C_Quinoa_Scaffold_1040+View
Chenopodium quinoaAUR62010177ATL80: RING-H2 finger protein ATL80C_Quinoa_Scaffold_1257+View
Capsella rubellaCarub.0001s2028PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDscaffold_1+View
Capsella rubellaCarub.0002s2332PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDscaffold_2+View
Cucumis sativus L.CsaV3_4G037520RING-H2 finger protein ATL80chr4+View
Daucus carotaDCAR_016793hypothetical proteinDCARv2_Chr5+View
Davidia involucrataDinv40207GWHABJS00000014-View
Davidia involucrataDinv28305GWHABJS00000012+View
Durio zibethinusDuzib041G0072NW_019167826.1-View
Durio zibethinusDuzib093G2091NW_019167937.1+View
Durio zibethinusDuzib147G0296NW_019168470.1+View
Durio zibethinusDuzib116G0197NW_019167949.1-View
Eucalyptus grandisEucgr.F01804Chr06+View
Eucalyptus grandisEucgr.I02211Chr09-View
Eutrema salsugineumThhalv10019183m.gPTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDscaffold_9-View
Eutrema salsugineumThhalv10009964m.gPTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDscaffold_5-View
Fragaria x ananassaFAN24G2574PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATEDFvb2-2-View
Fragaria x ananassaFAN27G1023PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATEDFvb2-1+View
Fragaria vescaFvH4_2g16840PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATEDFvb2+View
Gossypium hirsutumGohir.D01G087600PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDD01-View
Gossypium hirsutumGohir.A01G102500PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDA01-View
Glycine maxGlyma.06G015200PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDGm06-View
Glycine maxGlyma.16G112200PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDGm16+View
Gossypium raimondiiGorai.002G113500Chr02-View
Lupinus albusLalb_Chr23g0265601PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDLalb_Chr23-View
Lupinus albusLalb_Chr08g0246511PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDLalb_Chr08+View
Lotus japonicusLj1g0023581PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDchr1-View
Magnolia biondiiMBI08_g29075_MAGBIOAED:0.03Chr08-View
Malus domesticaMD06G1005400RING/U-box superfamily proteinChr06-View
Malus domesticaMD02G1113400RING/U-box superfamily proteinChr02-View
Manihot esculentaManes.18G002800Chromosome18-View
Manihot esculentaManes.05G126000Chromosome05-View
Manihot esculentaManes.01G156900Chromosome01+View
Medicago truncatulaMedtr3g116000anaphase-promoting complex subunit 11 RING-H2 finger proteinchr3+View
Nelumbo nuciferaNn5g31023chr5+View
Nelumbo nuciferaNn6g31665chr6-View
Nicotiana tabacumNitab4.5_0001756g0170Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-typeNitab4.5_0001756-View
Petunia axillarisPeaxi162Scf00064g00139RING/U-box superfamily proteinPeaxi162Scf00064+View
Petunia axillarisPeaxi162Scf00680g00410RING/U-box superfamily proteinPeaxi162Scf00680+View
Punica granatumPGR031G1175NC_045127.1+View
Punica granatumPGR083G1652NC_045133.1+View
Papaver somniferumPSO541G0890NC_039363.1+View
Papaver somniferumPSO675G4511NC_039358.1+View
Papaver somniferumPSO170G5591NC_039360.1-View
Papaver somniferumPSO210G0303NC_039359.1+View
Populus trichocarpaPotri.002G006400PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr02-View
Populus trichocarpaPotri.005G255200PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATEDChr05+View
Phaseolus vulgarisPhvul.003G271400PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDChr03+View
Phaseolus vulgarisPhvul.009G007400KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 componentChr09+View
Quercus lobataQL02p015355CM012294-View
Rosa chinensisRcHm_v2.0_Chr6g0280971RcHm_v2.0_Chr6+View
Rhododendron simsiiRhsim10G0192000chr10-View
Rhododendron simsiiRhsim07G0257300chr07+View
Rhododendron simsiiRhsim06G0004100chr06-View
Salix brachistaSabra02G0004500GWHAAZH00000002-View
Salix brachistaSabra05G0197700GWHAAZH00000005+View
Simmondsia chinensisSc15g0004090GWHAASQ00000015-View
Simmondsia chinensisSc26g0004720GWHAASQ00000026+View
Sechium eduleSed0005605LG01-View
Sapria himalayanaSHI07959scaffold7_18583372-View
Solanum lycopersicumSolyc04g082690.1RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LI04_ARTAN)SL4.0ch04+View
Solanum lycopersicumSolyc12g094690.1RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LI04_ARTAN)SL4.0ch12+View
Schrenkiella parvulaSp5g31570PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDch5-7+View
Schrenkiella parvulaSp1g18520PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMEDch1-1+View
Solanum pennelliiSopen02g027080ATL8 | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily proteinSpenn-ch02-View
Solanum pennelliiSopen04g036320ATL8 | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily proteinSpenn-ch04+View
Solanum pennelliiSopen12g031590RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to chitin | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily proteinSpenn-ch12+View
Solanum tuberosumPGSC0003DMG400009919Zinc finger family proteinST4.03ch04+View
Solanum tuberosumPGSC0003DMG400023160RING-H2 finger protein ATL80ST4.03ch02-View
Solanum tuberosumPGSC0003DMG400029401RING-H2 finger protein ATL80ST4.03ch12+View
Trochodendron aralioidesTAR381G1050group11-View
Trochodendron aralioidesTAR628G0785group5+View
Trochodendron aralioidesTAR376G0879group14+View
Theobroma cacaoThecc.08G064100RING/U-box superfamily proteinChromosome_8+View
Theobroma cacaoThecc.01G002800Basic helix-loop-helix-containing proteinChromosome_1-View
Tarenaya hasslerianaTHA.LOC104812000RING-H2 finger protein ATL80-likeNW_010965372.1+View
Trifolium pratenseTPR.G38120Tp57577_TGAC_v2_LG7+View
Tripterygium wilfordiiTWI56G0701NC_052242.1+View
Vaccinium macrocarponvmacro04421Similar to ATL8: RING-H2 finger protein ATL8 (Arabidopsis thaliana OX%3D3702)chr12_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo1309G2755CM024072.1+View
Vigna mungoVMungo0251G1072CM024069.1+View
Zea maysZm00001eb022240Zm00001e002233 RING-H2 finger protein ATL801-View