Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0019919PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Vitis vinifera]Chr9+View
CSS0039726PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Eucalyptus grandis]Chr13-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG11G10730LG-11-View
Acer truncatumAtru.chr5.1354chr5+View
Actinidia chinensisActinidia21093Lachesis_group9-View
Actinidia chinensisActinidia24317Lachesis_group24+View
Actinidia chinensisActinidia24875Lachesis_group15-View
Arabidopsis lyrataAL1G12840scaffold_1-View
Avicennia marinaMSTRG.21578ScioBoG_26769_HRSCAF_26899-View
Amaranthus hybridusAh.13g074300BTB/POZ and MATH domain-containing protein 2 (Protein BTB-POZ AND MATH DOMAIN 2) (AtBPM2)AmaHy_arrow1_Scaffold_13-View
Aquilegia oxysepalaAqoxy5G00540CHR05-View
Aquilegia oxysepalaAqoxy2G03235CHR02+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.A338HQKOG3448 - Predicted snRNP core proteinarahy.Tifrunner.gnm1.Arahy.16-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.TWVU8PK10523 - speckle-type POZ protein (SPOP)arahy.Tifrunner.gnm1.Arahy.06+View
Arabidopsis thalianaAT1G03330Small nuclear ribonucleoprotein family protein Small nuclear ribonucleoprotein family protein%3B CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163)%2C U6 snRNA-associated Sm-like protein LSm2 (InterPro:IPR016654)%2C Like-Sm ribonucleoprotein (LSM) domain%2C eukaryotic/archaea-type (InterPro:IPR006649)%2C Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920)%3B Has 762 Blast hits to 762 proteins in 209 species: Archae - 2%3B Bacteria - 0%3B Metazoa - 303%3B Fungi - 225%3B Plants - 97%3B Viruses - 0%3B Other Eukaryotes - 135 (source: NCBI BLink).Chr1-View
Amborella trichopodaATR0626G009AmTr_v1.0_scaffold00025-View
Brassica carinataBcaB01g04880ChrB01-View
Brassica carinataBcaC04g18629ChrC04-View
Brassica carinataBcaB08g36629ChrB08-View
Brassica carinataBcaB01g05286ChrB01+View
Brassica carinataBcaC05g24542ChrC05+View
Brassica napusA03p09250A03+View
Brassica napusC09p57480C09-View
Brassica napusA10p01870A10-View
Brassica oleraceaBolC3t13551HC3+View
Brassica oleraceaBolC5t28963HC5-View
Brassica rapaBraA03t10244ZA03+View
Brassica rapaBraA10t42461ZA10-View
Cannabis sativaCANSAT78G1014NC_044376.1-View
Cannabis sativaCANSAT25G2118NC_044370.1-View
Cicer arietinum L.Ca_08596_v3Ca_LG3_v3+View
Cicer arietinum L.Ca_09775_v3Ca_LG4_v3-View
Cicer arietinum L.Ca_08562_v3Ca_LG3_v3+View
Corylus avellanaHaze_04755Similar to BPM2: BTB/POZ and MATH domain-containing protein 2 (Arabidopsis thaliana OX%3D3702)2-View
Corylus avellanaHaze_00979Similar to BPM2: BTB/POZ and MATH domain-containing protein 2 (Arabidopsis thaliana OX%3D3702)1-View
Coffea canephoraCc01_g19800U6 snRNA-associated Sm-like protein LSm2chr1-View
Citrus clementinaCiclev10005094m.gscaffold_9+View
Citrus clementinaCiclev10023059m.gscaffold_3-View
Ceratophyllum demersumCDE01G070111-View
Ceratophyllum demersumCDE05G11763+View
Ceratophyllum demersumCDE12G044810-View
Carpinus fangianaCfa006100Cfa02+View
Carpinus fangianaCfa015559Cfa06-View
Cardamine hirsutaCARHR002640U6 snRNA-associated Sm-like protein LSm2Chr1-View
Carya illinoinensisCiPaw.01G158400K10523 - speckle-type POZ protein (SPOP)Chr01+View
Carya illinoinensisCiPaw.08G103000K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2)Chr08+View
Carya illinoinensisCiPaw.07G094800K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2)Chr07-View
Citrullus lanatusClCG05G005490Speckle-type POZ protein, putativeCG_Chr05-View
Citrullus lanatusClCG06G005710Speckle-type POZ protein, putativeCG_Chr06+View
Cucumis meloMELO3C006573.2BTB-POZ and MATH domain 2chr06-View
Cucumis meloMELO3C021393.2BTB-POZ and MATH domain 2chr11-View
Chenopodium quinoaAUR62030045spop: Speckle-type POZ proteinC_Quinoa_Scaffold_1447+View
Capsella rubellaCarub.0001s0244K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2)scaffold_1-View
Cucumis sativus L.CsaV3_3G013800BTB/POZ and MATH domain-containing proteinchr3-View
Daucus carotaDCAR_018402hypothetical proteinDCARv2_Chr5+View
Daucus carotaDCAR_030589hypothetical proteinDCARv2_Chr9+View
Daucus carotaDCAR_002421hypothetical proteinDCARv2_Chr1-View
Daucus carotaDCAR_002756hypothetical proteinDCARv2_Chr1-View
Davidia involucrataDinv32966GWHABJS00000010-View
Davidia involucrataDinv11259GWHABJS00000007+View
Davidia involucrataDinv44471GWHABJS00000014-View
Durio zibethinusDuzib138G1757NW_019167893.1+View
Durio zibethinusDuzib133G1496NW_019167938.1+View
Durio zibethinusDuzib211G0679NW_019168049.1+View
Erigeron canadensisECA248G1345Conyza_canadensis_scaffold:9+View
Eucalyptus grandisEucgr.K03403Chr11-View
Erythranthe guttataMigut.D00259scaffold_4+View
Eutrema salsugineumThhalv10009199m.gK12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2)scaffold_5+View
Fragaria x ananassaFAN07G2134K10523 - speckle-type POZ protein (SPOP)Fvb4-4+View
Fragaria x ananassaFAN17G1225KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domainsFvb4-2+View
Fragaria x ananassaFAN22G1375K10523 - speckle-type POZ protein (SPOP)Fvb4-1-View
Fragaria x ananassaFAN27G0978K10523 - speckle-type POZ protein (SPOP)Fvb2-1-View
Fragaria x ananassaFAN20G2590K10523 - speckle-type POZ protein (SPOP)Fvb2-3+View
Fragaria x ananassaFAN15G2043K10523 - speckle-type POZ protein (SPOP)Fvb2-4+View
Fragaria x ananassaFAN24G2483K10523 - speckle-type POZ protein (SPOP)Fvb2-2+View
Fragaria x ananassaFAN12G3170K10523 - speckle-type POZ protein (SPOP)Fvb4-3-View
Fragaria vescaFvH4_2g24040K10523 - speckle-type POZ protein (SPOP)Fvb2-View
Gossypium hirsutumGohir.D08G203300KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domainsD08+View
Gossypium hirsutumGohir.A11G120200K10523 - speckle-type POZ protein (SPOP)A11+View
Gossypium hirsutumGohir.D11G124900K10523 - speckle-type POZ protein (SPOP)D11+View
Gossypium hirsutumGohir.A08G069900PTHR13829//PTHR13829:SF2 - SNRNP CORE PROTEIN FAMILY MEMBER // U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM2A08-View
Gossypium hirsutumGohir.A02G025000K10523 - speckle-type POZ protein (SPOP)A02-View
Gossypium hirsutumGohir.D08G054600K10523 - speckle-type POZ protein (SPOP)D08+View
Gossypium hirsutumGohir.D02G032200K10523 - speckle-type POZ protein (SPOP)D02-View
Gossypium hirsutumGohir.D08G079000K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2)D08+View
Gossypium hirsutumGohir.A08G185200KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domainsA08+View
Gossypium hirsutumGohir.A08G044900K10523 - speckle-type POZ protein (SPOP)A08+View
Glycine maxGlyma.03G150800K10523 - speckle-type POZ protein (SPOP)Gm03+View
Glycine maxGlyma.19G153400K10523 - speckle-type POZ protein (SPOP)Gm19+View
Glycine maxGlyma.02G149600K10523 - speckle-type POZ protein (SPOP)Gm02-View
Glycine maxGlyma.10G024300K10523 - speckle-type POZ protein (SPOP)Gm10+View
Gossypium raimondiiGorai.007G134100Chr07+View
Gossypium raimondiiGorai.004G083500Chr04-View
Gossypium raimondiiGorai.005G035700Chr05-View
Gossypium raimondiiGorai.004G215300Chr04+View
Helianthus annuusHanXRQChr01g0002411Putative LSM domain; U6 snRNA-associated Sm-like protein LSm2HanXRQChr01-View
Hydrangea macrophyllaHma1.2p1_0628F.1_g191810Hma1.2p1_0628F.1+View
Hydrangea macrophyllaHma1.2p1_0257F.1_g103820Hma1.2p1_0257F.1-View
Lupinus albusLalb_Chr21g0306571K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2)Lalb_Chr21-View
Lupinus albusLalb_Chr06g0163111K10523 - speckle-type POZ protein (SPOP)Lalb_Chr06-View
Lupinus albusLalb_Chr02g0142891PTHR13829//PTHR13829:SF2 - SNRNP CORE PROTEIN FAMILY MEMBER // U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM2Lalb_Chr02-View
Lotus japonicusLj1g0007647K10523 - speckle-type POZ protein (SPOP)chr1-View
Lonicera japonicaLj2C1179G14GWHAAZE00000002-View
Lactuca sativaLsat_1_v5_gn_9_4501Lsat_1_v8_lg_9+View
Lactuca sativaLsat_1_v5_gn_5_187481Lsat_1_v8_lg_5+View
Magnolia biondiiMBI17_g11989_MAGBIOAED:0.15Chr17+View
Malus domesticaMD16G1181700BTB-POZ and MATH domain 2Chr16+View
Malus domesticaMD13G1181000BTB-POZ and MATH domain 2Chr13+View
Malus domesticaMD11G1290500BTB-POZ and MATH domain 2Chr11-View
Malus domesticaMD03G1269700BTB-POZ and MATH domain 2Chr03-View
Manihot esculentaManes.05G073000Chromosome05+View
Manihot esculentaManes.03G186200Chromosome03-View
Manihot esculentaManes.15G021800Chromosome15+View
Manihot esculentaManes.01G210300Chromosome01-View
Medicago truncatulaMedtr1g072650BTB/POZ/MATH-domain proteinchr1-View
Medicago truncatulaMedtr7g094490BTB/POZ/MATH-domain proteinchr7+View
Nelumbo nuciferaNn4g26161chr4+View
Nelumbo nuciferaNn1g02137chr1+View
Nicotiana tabacumNitab4.5_0002093g0040Like-Sm (LSM) domain, U6 snRNA-associated Sm-like protein LSm2, Ribonucleoprotein LSM domain, eukaryotic/archaea-type, Ribonucleoprotein LSM domainNitab4.5_0002093-View
Nicotiana tabacumNitab4.5_0001323g0030U6 snRNA-associated Sm-like protein LSm2, Ribonucleoprotein LSM domain, Like-Sm (LSM) domain, Ribonucleoprotein LSM domain, eukaryotic/archaea-typeNitab4.5_0001323-View
Olea europaeaOeu047884.2scaffold505-View
Olea europaeaOeu011172.1scaffold1424-View
Oryza sativa ssp. japonicaOs07g0655300Kelch related domain containing protein.chr07+View
Petunia axillarisPeaxi162Scf00095g00912BTB-POZ and MATH domain 2Peaxi162Scf00095+View
Punica granatumPGR044G0879NC_045134.1-View
Prunus persicaPrupe.1G149100K10523 - speckle-type POZ protein (SPOP)Pp01+View
Prunus persicaPrupe.8G245800K10523 - speckle-type POZ protein (SPOP)Pp08-View
Papaver somniferumPSO210G0485NC_039359.1+View
Papaver somniferumPSO407G0432NW_020651082.1+View
Papaver somniferumPSO832G0267NC_039367.1+View
Populus trichocarpaPotri.010G029500PF00651//PF00917 - BTB/POZ domain (BTB) // MATH domain (MATH)Chr10+View
Populus trichocarpaPotri.008G200700K10523 - speckle-type POZ protein (SPOP)Chr08+View
Phaseolus vulgarisPhvul.001G148400K10523 - speckle-type POZ protein (SPOP)Chr01+View
Phaseolus vulgarisPhvul.007G169300Chr07+View
Quercus lobataQL12p02265912-View
Quercus lobataQL06p0058506-View
Rosa chinensisRcHm_v2.0_Chr6g0291771RcHm_v2.0_Chr6-View
Rhododendron simsiiRhsim01G0276800chr01-View
Rhododendron simsiiRhsim13G0022300chr13+View
Striga asiaticaSGA_v2.0_scaffold11G05791scaffold11+View
Striga asiaticaSGA_v2.0_scaffold1G00443scaffold1+View
Striga asiaticaSGA_v2.0_scaffold172G39037scaffold172-View
Salvia bowleyanaSalBow6G0773GWHASIU00000002+View
Salvia bowleyanaSalBow4G1726GWHASIU00000008+View
Salix brachistaSabra08G0160500GWHAAZH00000008-View
Salix brachistaSabra10G0011700GWHAAZH00000010-View
Simmondsia chinensisSc19g0004620GWHAASQ00000019-View
Simmondsia chinensisSc05g0005070GWHAASQ00000005+View
Sechium eduleSed0005585LG04+View
Solanum lycopersicumSolyc06g084350.3U6 snRNA-associated Sm-like protein LSm2 (AHRD V3.3 *** A0A2G2ZWI3_CAPAN)SL4.0ch06-View
Solanum lycopersicumSolyc01g080250.3BTB/POZ and MATH domain-containing protein 2-like (AHRD V3.3 *** A0A1S3ZJG5_TOBAC)SL4.0ch01-View
Solanum lycopersicumSolyc09g072970.3U6 snRNA-associated Sm-like protein LSm2 (AHRD V3.3 *** A0A2G2ZWI3_CAPAN)SL4.0ch09-View
Schrenkiella parvulaSp1g02320K12621 - U6 snRNA-associated Sm-like protein LSm2 (LSM2)ch1-1-View
Solanum pennelliiSopen01g032030BTB-POZ and MATH domain 2 (BPM2) | CONTAINS InterPro DOMAIN/s: TRAF-like , MATH , BTB/POZ fold , BTB/POZ , Kelch related , BTB/POZ-like , TRAF-type | BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 1Spenn-ch01-View
Solanum pennelliiSopen09g028780Small nuclear ribonucleoprotein family protein | CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain , U6 snRNA-associated Sm-like protein LSm2 , Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type , Like-Sm ribonucleoprotein (LSM)-related domainSpenn-ch09-View
Solanum pennelliiSopen06g035740Small nuclear ribonucleoprotein family protein | CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain , U6 snRNA-associated Sm-like protein LSm2 , Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type , Like-Sm ribonucleoprotein (LSM)-related domainSpenn-ch06-View
Solanum tuberosumPGSC0003DMG400004349Speckle-type POZ proteinST4.03ch01+View
Solanum tuberosumPGSC0003DMG400020045Speckle-type POZ proteinST4.03ch06-View
Solanum tuberosumPGSC0003DMG400003836Speckle-type POZ proteinST4.03ch09-View
Selenicereus undatusHund12211Scaffold_33679-View
Trochodendron aralioidesTAR362G1116group17+View
Trochodendron aralioidesTAR365G0146group16+View
Theobroma cacaoThecc.01G284300Chromosome_1-View
Theobroma cacaoThecc.04G219600BTB-POZ and MATH domain 2Chromosome_4+View
Tarenaya hasslerianaTHA.LOC104801217sm-like protein LSM2NW_010969548.1+View
Trifolium pratenseTPR.G32825Tp57577_TGAC_v2_scaf_186+View
Tripterygium wilfordiiTWI53G1692NC_052244.1+View
Tripterygium wilfordiiTWI59G0344NC_052248.1+View
Tripterygium wilfordiiTWI23G0153NC_052239.1+View
Tripterygium wilfordiiTWI09G1020NC_052245.1+View
Tripterygium wilfordiiTWI73G1064NC_052232.1-View
Utricularia gibbaunitig_61.g26324unitig_61+View
Vaccinium macrocarponvmacro14940Similar to LSM2: Sm-like protein LSM2 (Arabidopsis thaliana OX%3D3702)chr7_Vaccinium_macrocarpon_Stevens_v1-View
Vaccinium macrocarponvmacro02547Similar to BPM2: BTB/POZ and MATH domain-containing protein 2 (Arabidopsis thaliana OX%3D3702)chr9_Vaccinium_macrocarpon_Stevens_v1+View
Vigna mungoVMungo0720G2654CM024071.1-View
Vigna mungoVMungo1383G0226CM024070.1+View
Vitis viniferaGSVIVG01017872001chr5+View
Vitis viniferaGSVIVG01011077001chr7-View