Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0015477PREDICTED: intracellular protein transport protein USO1 isoform X2 [Nicotiana sylvestris]Chr14+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG9G340LG-9-View
Acer truncatumAtru.chr9.2042chr9-View
Actinidia chinensisActinidia27335Lachesis_group14+View
Actinidia chinensisActinidia22719Lachesis_group20+View
Actinidia chinensisActinidia04211Lachesis_group6-View
Actinidia chinensisActinidia01396Lachesis_group23-View
Arabidopsis lyrataAL2G10610scaffold_2-View
Arabidopsis lyrataAL7G47470scaffold_7-View
Avicennia marinaMSTRG.1816ScioBoG_102834_HRSCAF_103055-View
Avicennia marinaMSTRG.25657ScioBoG_4119_HRSCAF_4138+View
Amaranthus hybridusAh.07g197190AmaHy_arrow1_Scaffold_7+View
Amaranthus hybridusAh.12g052300COP1-interactive protein 1AmaHy_arrow1_Scaffold_12+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.P7UIV5PTHR32258:SF4 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEINarahy.Tifrunner.gnm1.Arahy.15+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.Q3GPI2PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.03-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.F3VNHJPTHR32258:SF4 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEINarahy.Tifrunner.gnm1.Arahy.05-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.DN0YA4PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMEDarahy.Tifrunner.gnm1.Arahy.13-View
Arabidopsis thalianaAT5G41780myosin heavy chain-like protein myosin heavy chain-related%3B BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64320.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).Chr5+View
Arabidopsis thalianaAT1G64320myosin heavy chain-like protein myosin heavy chain-related%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to cadmium ion%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: male gametophyte%2C flower%2C cultured cell%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%3B BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G41780.1)%3B Has 120676 Blast hits to 61544 proteins in 2785 species: Archae - 1971%3B Bacteria - 17622%3B Metazoa - 55572%3B Fungi - 10250%3B Plants - 6487%3B Viruses - 441%3B Other Eukaryotes - 28333 (source: NCBI BLink).Chr1+View
Brassica carinataBcaC04g22558ChrC04+View
Brassica carinataBcaC08g44555ChrC08+View
Brassica carinataBcaC02g08917ChrC02-View
Brassica carinataBcaB07g31454ChrB07+View
Brassica carinataBcaB02g07879ChrB02-View
Brassica napusA09p14790A09-View
Brassica napusC06p20200C06+View
Brassica napusA04p14960A04+View
Brassica napusC04p49150C04+View
Brassica napusA07p20910A07+View
Brassica napusC09p17910C09-View
Brassica oleraceaBolC6t37201HC6+View
Brassica oleraceaBolC9t54688HC9-View
Brassica oleraceaBolC4t26499HC4+View
Brassica rapaBraA04t17139ZA04+View
Brassica rapaBraA09t37126ZA09-View
Brassica rapaBraA07t29778ZA07+View
Beta vulgarisEL10Ac5g12883PTHR13140//PTHR13140:SF470 - MYOSIN // SUBFAMILY NOT NAMEDChr5_EL10_PGA_scaffold2+View
Capsicum annuumCAN.G532.94PGAv.1.6.scaffold532+View
Capsicum annuumCAN.G792.47PGAv.1.6.scaffold792-View
Cannabis sativaCANSAT21G0822NC_044374.1+View
Cicer arietinum L.Ca_17494_v3Ca_LG6_v3-View
Cicer arietinum L.Ca_24520_v3Ca_LG8_v3-View
Corylus avellanaHaze_08667Similar to CIP1: COP1-interactive protein 1 (Arabidopsis thaliana OX%3D3702)4-View
Coffea canephoraCc08_g15770Putative myosin heavy chain-relatedchr8+View
Citrus clementinaCiclev10018618m.gscaffold_3-View
Ceratophyllum demersumCDE10G13558-View
Carpinus fangianaCfa012842Cfa05-View
Cardamine hirsutaCARHR212780Myosin heavy chain-like proteinChr7-View
Cardamine hirsutaCARHR046630myosin heavy chain-relatedChr2-View
Carya illinoinensisCiPaw.12G085000PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMEDChr12-View
Carya illinoinensisCiPaw.11G123900PTHR13140//PTHR13140:SF470 - MYOSIN // SUBFAMILY NOT NAMEDChr11-View
Citrullus lanatusClCG07G014890Myosin-11CG_Chr07+View
Cucumis meloMELO3C016308.2myosin-11-likechr07-View
Corchorus olitoriusCOL.COLO4_21718PrefoldinAWUE01017755.1-View
Carica papayaCpa.g.sc79.65supercontig_79+View
Carica papayaCpa.g.sc122.43supercontig_122-View
Chenopodium quinoaAUR62019807Protein of unknown functionC_Quinoa_Scaffold_1480+View
Chenopodium quinoaAUR62010808Protein of unknown functionC_Quinoa_Scaffold_1280+View
Capsella rubellaCarub.0002s0048PTHR32258:SF4 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEINscaffold_2-View
Capsella rubellaCarub.0007s3359PTHR13140:SF433 - COP1-INTERACTIVE PROTEIN 1scaffold_7-View
Cucumis sativus L.CsaV3_4G006410golgin subfamily A member 6-like protein 22chr4+View
Daucus carotaDCAR_005027hypothetical proteinDCARv2_Chr2+View
Davidia involucrataDinv37550GWHABJS00000017-View
Davidia involucrataDinv38857GWHABJS00000003-View
Durio zibethinusDuzib205G1563NW_019168381.1+View
Durio zibethinusDuzib084G0477NW_019167827.1+View
Erigeron canadensisECA246G1519Conyza_canadensis_scaffold:8-View
Erigeron canadensisECA240G2507Conyza_canadensis_scaffold:5-View
Erigeron canadensisECA233G6022Conyza_canadensis_scaffold:1-View
Eucalyptus grandisEucgr.E00844Chr05+View
Erythranthe guttataMigut.A00678scaffold_1-View
Erythranthe guttataMigut.E01235scaffold_5+View
Eutrema salsugineumThhalv10023387m.gPTHR32258:SF4 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEINscaffold_8-View
Eutrema salsugineumThhalv10027620m.gPTHR13140:SF433 - COP1-INTERACTIVE PROTEIN 1scaffold_14-View
Fragaria x ananassaFAN13G0971KOG0018//KOG0962//KOG0971//KOG0978//KOG4674 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) // DNA repair protein RAD50, ABC-type ATPase/SMC superfamily // Microtubule-associated protein dynactin DCTN1/Glued // E3 ubiquitin ligase involved in syntaxin degradation // Uncharacterized conserved coiled-coil proteinFvb5-2+View
Fragaria x ananassaFAN18G3989PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDFvb5-1-View
Fragaria x ananassaFAN08G2643KOG0018//KOG4674 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) // Uncharacterized conserved coiled-coil proteinFvb5-3-View
Fragaria x ananassaFAN04G1467PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDFvb5-4-View
Fragaria vescaFvH4_5g04071PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDFvb5+View
Gossypium hirsutumGohir.D03G081800PF07765 - KIP1-like protein (KIP1)D03+View
Gossypium hirsutumGohir.A02G102200KOG0933//KOG4593 - Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) // Mitotic checkpoint protein MAD1A02-View
Gossypium hirsutumGohir.D08G132401PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDD08-View
Glycine maxGlyma.08G021300PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDGm08+View
Glycine maxGlyma.05G215000PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDGm05+View
Gossypium raimondiiGorai.003G081700Chr03-View
Gossypium raimondiiGorai.004G135300Chr04-View
Helianthus annuusHanXRQChr17g0535111Uncharacterized protein, conserved in plant genome(s), supported by expression dataHanXRQChr17+View
Hydrangea macrophyllaHma1.2p1_0952F.1_g240920Hma1.2p1_0952F.1+View
Lupinus albusLalb_Chr05g0224241KOG0962//KOG4674 - DNA repair protein RAD50, ABC-type ATPase/SMC superfamily // Uncharacterized conserved coiled-coil proteinLalb_Chr05-View
Lupinus albusLalb_Chr16g0390551PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMEDLalb_Chr16+View
Lotus japonicusLjContig00312_ERROPOS870357g0010036PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDContig00312_ERROPOS870357-View
Lotus japonicusLj4g0008940PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMEDchr4-View
Lonicera japonicaLj8P210T83GWHAAZE00000008-View
Lactuca sativaLsat_1_v5_gn_6_12040PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDLsat_1_v8_lg_6+View
Lactuca sativaLsat_1_v5_gn_6_85821Lsat_1_v8_lg_6-View
Magnolia biondiiMBI07_g09921_MAGBIOAED:0.39Chr07-View
Malus domesticaMD14G1121400myosin heavy chain-relatedChr14+View
Malus domesticaMD06G1102200myosin heavy chain-relatedChr06+View
Manihot esculentaManes.02G012600Chromosome02-View
Medicago truncatulaMedtr8g099265myosin heavy chain-like proteinchr8+View
Nicotiana tabacumNitab4.5_0002944g0210UnknownNitab4.5_0002944-View
Nicotiana tabacumNitab4.5_0000223g0210UnknownNitab4.5_0000223+View
Olea europaeaOeu009945.1scaffold138+View
Petunia axillarisPeaxi162Scf00102g00176Coiled-coil domain-containing-like proteinPeaxi162Scf00102+View
Petunia axillarisPeaxi162Scf00117g00131Coiled-coil domain-containing protein, putativePeaxi162Scf00117-View
Petunia axillarisPeaxi162Scf00074g01134COP1-interactive protein 1Peaxi162Scf00074-View
Punica granatumPGR042G1587NC_045130.1-View
Prunus persicaPrupe.5G115200Pp05+View
Pisum sativumPsat7g027480KIP1-like proteinchr7LG7+View
Populus trichocarpaPotri.003G137300PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDChr03+View
Populus trichocarpaPotri.001G094200PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMEDChr01-View
Phaseolus vulgarisPhvul.002G163000PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDChr02+View
Phaseolus vulgarisPhvul.002G296200PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATEDChr02+View
Quercus lobataQL02p031434CM012294-View
Rosa chinensisRcHm_v2.0_Chr7g0195431RcHm_v2.0_Chr7-View
Rhododendron simsiiRhsim07G0084000chr07-View
Rhododendron simsiiRhsim02G0241100chr02+View
Striga asiaticaSGA_v2.0_scaffold111G31429scaffold111-View
Striga asiaticaSGA_v2.0_scaffold173G39089scaffold173-View
Striga asiaticaSGA_v2.0_scaffold144G35850scaffold144+View
Salix brachistaSabra03G0098800GWHAAZH00000003+View
Salix brachistaSabra01G0070100GWHAAZH00000001-View
Simmondsia chinensisSc01g0010120GWHAASQ00000001+View
Sechium eduleSed0025225LG13-View
Sechium eduleSed0022097LG07-View
Sapria himalayanaSHI07008scaffold4_21100006-View
Solanum lycopersicumSolyc08g008260.2myosin heavy chain-like protein (AHRD V3.3 *-* AT5G41780.4)SL4.0ch08+View
Solanum lycopersicumSolyc08g082010.3Myosin heavy chain-related protein (AHRD V3.3 *-* A0A2U1NUP5_ARTAN)SL4.0ch08+View
Schrenkiella parvulaSp2g00430PF07765 - KIP1-like protein (KIP1)ch2-1-View
Schrenkiella parvulaSp7g00300PTHR13140//PTHR13140:SF433 - MYOSIN // COP1-INTERACTIVE PROTEIN 1ch7-1-View
Solanum pennelliiSopen08g004110encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light. | COP1-interactive protein 1 (CIP1) | FUNCTIONS IN: protein binding | INVOLVED IN: regulation of protein import into nucleus | LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Prefoldin | BEST Arabidopsis thaliana protein match is: myosin heavy chain-relatedSpenn-ch08+View
Solanum pennelliiSopen08g030310encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light. | COP1-interactive protein 1 (CIP1) | FUNCTIONS IN: protein binding | INVOLVED IN: regulation of protein import into nucleus | LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Prefoldin | BEST Arabidopsis thaliana protein match is: myosin heavy chain-relatedSpenn-ch08+View
Solanum tuberosumPGSC0003DMG400012303Centromeric protein EST4.03ch08+View
Solanum tuberosumPGSC0003DMG400005787Coiled-coil domain-containing proteinST4.03ch08+View
Selenicereus undatusHund11405Scaffold_10417-View
Trochodendron aralioidesTAR374G0929group12+View
Theobroma cacaoThecc.03G293100Coiled-coil domain-containingChromosome_3+View
Tarenaya hasslerianaTHA.LOC104823609golgin subfamily A member 6-like protein 22 isoform X1NW_010966881.1+View
Trifolium pratenseTPR.G6696Tp57577_TGAC_v2_LG2+View
Tripterygium wilfordiiTWI60G1278NC_052246.1+View
Tripterygium wilfordiiTWI15G0725NC_052247.1-View
Vaccinium macrocarponvmacro13912Similar to CIP1: COP1-interactive protein 1 (Arabidopsis thaliana OX%3D3702)chr7_Vaccinium_macrocarpon_Stevens_v1-View
Vigna mungoVMungo1215G3208CM024074.1-View
Vigna mungoVMungo0251G1783CM024069.1+View
Vitis viniferaGSVIVG01019499001chr2+View