Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0028641unnamed protein product [Coffea canephora]Chr1+View
CSS0021121Clathrin light chain 2 [Morus notabilis]Chr4-View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatumAtru.chr8.2222chr8+View
Actinidia chinensisActinidia29114Lachesis_group3-View
Arabidopsis lyrataAL5G32380scaffold_5-View
Avicennia marinaMSTRG.5583ScioBoG_102839_HRSCAF_103093-View
Aquilegia oxysepalaAqoxy4G02608CHR04-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.7I08U9PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2arahy.Tifrunner.gnm1.Arahy.12+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.GE0XP5PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2arahy.Tifrunner.gnm1.Arahy.02+View
Arabidopsis thalianaAT3G51890Clathrin light chain protein Clathrin light chain protein%3B FUNCTIONS IN: structural molecule activity%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%3B LOCATED IN: clathrin coat of trans-Golgi network vesicle%2C clathrin coat of coated pit%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996)%3B BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1)%3B Has 358 Blast hits to 358 proteins in 117 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 147%3B Fungi - 68%3B Plants - 116%3B Viruses - 0%3B Other Eukaryotes - 27 (source: NCBI BLink).Chr3-View
Amborella trichopodaATR0618G128AmTr_v1.0_scaffold00029+View
Beta vulgarisEL10Ac2g04812PTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2Chr2_EL10_PGA_scaffold6+View
Corylus avellanaHaze_20989Similar to At3g51890: Clathrin light chain 3 (Arabidopsis thaliana OX%3D3702)10+View
Corylus avellanaHaze_17212Similar to CLC2: Clathrin light chain 2 (Arabidopsis thaliana OX%3D3702)11+View
Coffea canephoraCc02_g06670Putative Clathrin light chain 3chr2-View
Coffea canephoraCc02_g13050Clathrin light chain 1chr2+View
Citrus clementinaCiclev10012107m.gscaffold_6+View
Citrus clementinaCiclev10032499m.gscaffold_4+View
Carpinus fangianaCfa001333Cfa01-View
Carpinus fangianaCfa017218Cfa07-View
Cardamine hirsutaCARHR161520Clathrin light chain proteinChr5-View
Carya illinoinensisCiPaw.02G191400PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2Chr02+View
Carya illinoinensisCiPaw.09G208100PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2Chr09+View
Citrullus lanatusClCG04G007110Clathrin light chain proteinCG_Chr04+View
Corchorus olitoriusCOL.COLO4_14549Clathrin light chainAWUE01015434.1-View
Carica papayaCpa.g.sc19.191supercontig_19-View
Chenopodium quinoaAUR62012233CLC2: Clathrin light chain 2C_Quinoa_Scaffold_1995+View
Chenopodium quinoaAUR62016976Os06g0731800: Clathrin light chain 2C_Quinoa_Scaffold_3787+View
Chenopodium quinoaAUR62022865CLC2: Clathrin light chain 2C_Quinoa_Scaffold_3378+View
Capsella rubellaCarub.0005s1824PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2scaffold_5-View
Cucumis sativus L.CsaV3_4G026140Clathrin light chainchr4-View
Daucus carotaDCAR_028840hypothetical proteinDCARv2_Chr8-View
Davidia involucrataDinv34397GWHABJS00000009+View
Davidia involucrataDinv17979GWHABJS00000004+View
Davidia involucrataDinv23090GWHABJS00000015+View
Durio zibethinusDuzib106G1760NW_019168492.1+View
Durio zibethinusDuzib106G0183NW_019168492.1-View
Durio zibethinusDuzib160G0836NW_019168015.1-View
Durio zibethinusDuzib128G1291NW_019168481.1+View
Durio zibethinusDuzib093G1925NW_019167937.1+View
Eucalyptus grandisEucgr.A00509Chr01+View
Erythranthe guttataMigut.J00182scaffold_10-View
Erythranthe guttataMigut.M01187scaffold_13+View
Erythranthe guttataMigut.F00674scaffold_6+View
Eutrema salsugineumThhalv10010607m.gPTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2scaffold_16+View
Fragaria x ananassaFAN03G2445PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2Fvb7-3+View
Fragaria x ananassaFAN05G2975PTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2Fvb6-3+View
Fragaria vescaFvH4_3g04840PTHR10639:SF7 - CLATHRIN LIGHT CHAINFvb3+View
Fragaria vescaFvH4_7g24260PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2Fvb7-View
Glycine maxGlyma.01G115100PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2Gm01+View
Gossypium raimondiiGorai.012G076300Chr12+View
Hydrangea macrophyllaHma1.2p1_0362F.1_g136120Hma1.2p1_0362F.1+View
Lotus japonicusLj3g0006543PTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2chr3+View
Lonicera japonicaLj8C68T16GWHAAZE00000008-View
Lonicera japonicaLj3A954T70GWHAAZE00000003-View
Lactuca sativaLsat_1_v5_gn_9_33780PTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2Lsat_1_v8_lg_9-View
Magnolia biondiiMBI05_g34491_MAGBIOAED:0.04Chr05+View
Malus domesticaMD01G1150700Clathrin light chain proteinChr01+View
Malus domesticaMD01G1132200Clathrin light chain proteinChr01+View
Manihot esculentaManes.10G014100Chromosome10-View
Manihot esculentaManes.08G091200Chromosome08+View
Manihot esculentaManes.07G128200Chromosome07+View
Nelumbo nuciferaNn2g13683chr2+View
Nelumbo nuciferaNn2g11452chr2+View
Nicotiana tabacumNitab4.5_0000335g0140Clathrin light chainNitab4.5_0000335+View
Petunia axillarisPeaxi162Scf00141g00331Clathrin light chain proteinPeaxi162Scf00141-View
Punica granatumPGR031G2913NC_045127.1-View
Prunus persicaPrupe.2G248500PTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2Pp02+View
Prunus persicaPrupe.4G043600PTHR10639:SF7 - CLATHRIN LIGHT CHAINPp04+View
Prunus persicaPrupe.6G275500PTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2Pp06+View
Papaver somniferumPSO384G1930NC_039368.1+View
Papaver somniferumPSO339G0637NC_039366.1-View
Populus trichocarpaPotri.008G066800PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2Chr08+View
Populus trichocarpaPotri.010G190400PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2Chr10-View
Populus trichocarpaPotri.016G114700PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2Chr16+View
Phaseolus vulgarisPhvul.010G002800PTHR10639:SF10 - CLATHRIN LIGHT CHAIN 2Chr10-View
Rosa chinensisRcHm_v2.0_Chr3g0463291RcHm_v2.0_Chr3-View
Rhododendron simsiiRhsim05G0211100chr05+View
Salvia bowleyanaSalBow5G2579GWHASIU00000003-View
Salix brachistaSabra16G0110600GWHAAZH00000016+View
Salix brachistaSabra10G0146800GWHAAZH00000010-View
Salix brachistaSabra11G0034000GWHAAZH00000011+View
Solanum lycopersicumSolyc09g014450.4Clathrin light chain (AHRD V3.3 *** A0A2G3BKE5_CAPCH)SL4.0ch09+View
Schrenkiella parvulaSp5g10380PTHR10639//PTHR10639:SF10 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN 2ch5-1+View
Solanum pennelliiSopen09g007260Clathrin light chain protein | FUNCTIONS IN: structural molecule activity | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: plasma membrane, chloroplast envelope | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Clathrin light chain | BEST Arabidopsis thaliana protein match is: Clathrin light chain proteinSpenn-ch09+View
Solanum tuberosumPGSC0003DMG400008502Conserved gene of unknown functionST4.03ch09-View
Selenicereus undatusHund15951Scaffold_33677-View
Trochodendron aralioidesTAR369G0741group18-View
Trochodendron aralioidesTAR623G0912group7+View
Trochodendron aralioidesTAR633G1797group2+View
Theobroma cacaoThecc.05G017800Clathrin light chain proteinChromosome_5-View
Theobroma cacaoThecc.10G020800Clathrin light chain proteinChromosome_10-View
Tripterygium wilfordiiTWI53G1472NC_052244.1+View
Tripterygium wilfordiiTWI38G0867NC_052252.1-View
Tripterygium wilfordiiTWI09G1493NC_052245.1-View
Vaccinium macrocarponvmacro20250Similar to At3g51890: Clathrin light chain 3 (Arabidopsis thaliana OX%3D3702)chr5_Vaccinium_macrocarpon_Stevens_v1+View
Vitis viniferaGSVIVG01033974001chr8+View
Vitis viniferaGSVIVG01032845001chr13+View