Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS004562160S ribosomal protein L11, putative [Ricinus communis]Chr8+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG10G13310LG-10+View
Acer truncatumAtru.chr6.2764chr6-View
Acer truncatumAtru.chr10.1590chr10-View
Actinidia chinensisActinidia10948Lachesis_group19-View
Actinidia chinensisActinidia39517Lachesis_group17+View
Actinidia chinensisActinidia11164Lachesis_group5-View
Arabidopsis lyrataAL4G41320scaffold_4+View
Avicennia marinaMSTRG.15084ScioBoG_19538_HRSCAF_19626-View
Avicennia marinaMSTRG.6782ScioBoG_102840_HRSCAF_103099-View
Amaranthus hybridusAh.01g015890AmaHy_arrow1_Scaffold_1+View
Aquilegia oxysepalaAqoxy1G02003CHR01+View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.QQZY3QK02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)arahy.Tifrunner.gnm1.Arahy.20-View
Arabidopsis thalianaAT2G42740ribosomal protein large subunit 16A encodes a cytosolic ribosomal protein L16%2C which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. ribosomal protein large subunit 16A (RPL16A)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic large ribosomal subunit%2C nucleolus%2C chloroplast%2C vacuole%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132)%2C Ribosomal protein L5%2C conserved site (InterPro:IPR020929)%2C Ribosomal protein L5%2C N-terminal (InterPro:IPR020927)%2C Ribosomal protein L5%2C C-terminal (InterPro:IPR020928)%3B BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2)%3B Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312%3B Bacteria - 5129%3B Metazoa - 255%3B Fungi - 163%3B Plants - 278%3B Viruses - 0%3B Other Eukaryotes - 1764 (source: NCBI BLink).Chr2+View
Brassica napusC06p25660C06+View
Brassica oleraceaBolC6t37729HC6+View
Beta vulgarisEL10Ac9g20984K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)Chr9_EL10_PGA_scaffold8+View
Capsicum annuumCAN.G1360.17PGAv.1.6.scaffold1360-View
Cannabis sativaCANSAT64G1245NC_044379.1+View
Corylus avellanaHaze_13427Similar to RPL11B: 60S ribosomal protein L11-2 (Arabidopsis thaliana OX%3D3702)5+View
Corylus avellanaHaze_06193Similar to RPL11: 60S ribosomal protein L11 (Oryza sativa subsp. indica OX%3D39946)2-View
Coffea canephoraCc05_g0853060S ribosomal protein L11chr5+View
Citrus clementinaCiclev10016875m.gscaffold_2+View
Ceratophyllum demersumCDE10G05858+View
Carya illinoinensisCiPaw.09G071700K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)Chr09+View
Carya illinoinensisCiPaw.03G192700K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)Chr03+View
Citrullus lanatusClCG03G00754060S ribosomal protein L11CG_Chr03-View
Citrullus lanatusClCG07G002650Ribosomal protein L11-likeCG_Chr07-View
Cucumis meloMELO3C002668.260S ribosomal protein L11chr12-View
Carica papayaCpa.g.sc52.157supercontig_52-View
Chenopodium quinoaAUR62024048RPL11A: 60S ribosomal protein L11-1C_Quinoa_Scaffold_3389-View
Chenopodium quinoaAUR62040437RPL11A: 60S ribosomal protein L11-1C_Quinoa_Scaffold_1279-View
Capsella rubellaCarub.0007s2251K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)scaffold_7-View
Daucus carotaDCAR_013278hypothetical proteinDCARv2_Chr4-View
Davidia involucrataDinv11959GWHABJS00000001-View
Durio zibethinusDuzib192G0814NW_019168037.1+View
Durio zibethinusDuzib235G1546NW_019167982.1-View
Eucalyptus grandisEucgr.D00478Chr04-View
Eucalyptus grandisEucgr.A01929Chr01+View
Erythranthe guttataMigut.M00275scaffold_13+View
Fragaria x ananassaFAN11G0047PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMEDFvb3-4+View
Fragaria x ananassaFAN21G1492PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMEDFvb3-2-View
Fragaria x ananassaFAN14G2161PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMEDFvb6-1+View
Fragaria x ananassaFAN16G0546PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMEDFvb3-3-View
Fragaria x ananassaFAN02G3837PTHR11994//PTHR11994:SF13 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMEDFvb6-4-View
Fragaria vescaFvH4_3g07450K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)Fvb3-View
Fragaria vescaFvH4_6g27670PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMEDFvb6-View
Gossypium hirsutumGohir.D10G036300K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)D10-View
Gossypium hirsutumGohir.A10G035600K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)A10-View
Glycine maxGlyma.12G131600K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)Gm12-View
Gossypium raimondiiGorai.011G038200Chr11-View
Gossypium raimondiiGorai.010G160100Chr10+View
Lonicera japonicaLj8C100G12GWHAAZE00000008-View
Lonicera japonicaLj1A677T62GWHAAZE00000001-View
Lactuca sativaLsat_1_v5_gn_7_24281K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)Lsat_1_v8_lg_7+View
Lactuca sativaLsat_1_v5_gn_4_48420K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)Lsat_1_v8_lg_4-View
Magnolia biondiiMBI07_g09548_MAGBIOAED:0.02Chr07-View
Malus domesticaMD09G1235900Ribosomal L5P family proteinChr09-View
Malus domesticaMD17G1264500Ribosomal L5P family proteinChr17-View
Malus domesticaMD05G1297100ribosomal protein large subunit 16AChr05-View
Malus domesticaMD10G1276900ribosomal protein large subunit 16AChr10-View
Manihot esculentaManes.16G041800Chromosome16+View
Manihot esculentaManes.17G058100Chromosome17+View
Medicago truncatulaMedtr4g08074050S ribosomal protein L5Pchr4-View
Nelumbo nuciferaNn1g04500chr1+View
Nelumbo nuciferaNn3g21125chr3-View
Nicotiana tabacumNitab4.5_0000249g0140Ribosomal protein L5, Ribosomal protein L5 domain, Ribosomal protein L5, conserved siteNitab4.5_0000249-View
Petunia axillarisPeaxi162Scf00384g00127Unknown proteinPeaxi162Scf00384-View
Petunia axillarisPeaxi162Scf00469g0053060S ribosomal protein L11-1Peaxi162Scf00469+View
Petunia axillarisPeaxi162Scf00229g0111460S ribosomal protein L11-2Peaxi162Scf00229-View
Punica granatumPGR142G3242NC_045128.1-View
Punica granatumPGR042G1504NC_045130.1-View
Prunus persicaPrupe.4G065200Pp04+View
Prunus persicaPrupe.3G113800K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)Pp03-View
Populus trichocarpaPotri.011G068900K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)Chr11+View
Quercus lobataQL05p0483495+View
Quercus lobataQL08p0422828+View
Rosa chinensisRcHm_v2.0_Chr5g0011401RcHm_v2.0_Chr5+View
Rhododendron simsiiRhsim02G0145200chr02+View
Rhododendron simsiiRhsim06G0129900chr06-View
Rhododendron simsiiRhsim04G0075900chr04+View
Salvia bowleyanaSalBow7G1038GWHASIU00000005+View
Salix brachistaSabra11G0049900GWHAAZH00000011+View
Simmondsia chinensisSc12g0003650GWHAASQ00000012+View
Simmondsia chinensisSc21g0004090GWHAASQ00000021-View
Sechium eduleSed0025716LG05-View
Sechium eduleSed0004754LG04-View
Solanum lycopersicumSolyc07g055230.460S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA)SL4.0ch07+View
Solanum lycopersicumSolyc12g010930.260S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA)SL4.0ch12+View
Solanum pennelliiSopen07g026990encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. | ribosomal protein large subunit 16A (RPL16A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 , Ribosomal protein L5, conserved site , Ribosomal protein L5, N-terminal , Ribosomal protein L5, C-terminal | BEST Arabidopsis thaliana protein match is: Ribosomal L5P family proteinSpenn-ch07-View
Solanum tuberosumPGSC0003DMG400020434Ribosomal protein L11ST4.03ch07+View
Solanum tuberosumPGSC0003DMG400007855Ribosomal protein L11ST4.03ch12-View
Selenicereus undatusHund00862Scaffold_33678-View
Trochodendron aralioidesTAR627G0718group6+View
Trochodendron aralioidesTAR624G0369group9+View
Trochodendron aralioidesTAR629G0405group0+View
Theobroma cacaoThecc.06G167400Chromosome_6-View
Theobroma cacaoThecc.01G153400Ribosomal L5P family proteinChromosome_1+View
Tarenaya hasslerianaTHA.LOC10480302160S ribosomal protein L11-1NW_010960188.1+View
Tripterygium wilfordiiTWI59G0955NC_052248.1+View
Tripterygium wilfordiiTWI23G0133NC_052239.1+View
Vaccinium macrocarponvmacro09203Similar to RPL11: 60S ribosomal protein L11 (Medicago sativa OX%3D3879)chr6_Vaccinium_macrocarpon_Stevens_v1+View
Vaccinium macrocarponvmacro12386Similar to RPL11A: 60S ribosomal protein L11-1 (Arabidopsis thaliana OX%3D3702)chr11_Vaccinium_macrocarpon_Stevens_v1+View
Vitis viniferaGSVIVG01021244001chr10+View
Vitis viniferaGSVIVG01020743001chr12-View