Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0028928PREDICTED: ras-related protein RABA5e [Prunus mume]Contig578+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG1G24940LG-1-View
Actinidia chinensisActinidia32940Lachesis_group0-View
Arabidopsis lyrataAL4G41790scaffold_4-View
Arabidopsis thalianaAT2G43130P-loop containing nucleoside triphosphate hydrolases superfamily protein encodes a protein belonging to the Rab/Ypt family of small GTPases%2C which are implicated in intracellular vesicular traffic. ARA4%3B FUNCTIONS IN: GTP binding%2C GTPase activity%3B INVOLVED IN: response to heat%2C inter-Golgi cisterna vesicle-mediated transport%3B LOCATED IN: trans-Golgi network%2C Golgi stack%2C plasma membrane%2C Golgi-associated vesicle%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041)%2C Ras (InterPro:IPR013753)%2C Rab11-related (InterPro:IPR015595)%2C Ras small GTPase%2C Ras type (InterPro:IPR003577)%2C Small GTPase%2C Rho type (InterPro:IPR003578)%2C Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Small GTPase (InterPro:IPR020851)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1)%3B Has 26465 Blast hits to 26427 proteins in 733 species: Archae - 21%3B Bacteria - 130%3B Metazoa - 13921%3B Fungi - 3601%3B Plants - 3013%3B Viruses - 20%3B Other Eukaryotes - 5759 (source: NCBI BLink).Chr2-View
Brassica carinataBcaC01g05260ChrC01+View
Brassica napusC03p28610C03-View
Brassica napusA03p24000A03-View
Brassica oleraceaBolC3t15225HC3-View
Brassica rapaBraA03t11612ZA03-View
Citrus clementinaCiclev10022137m.gscaffold_3+View
Cardamine hirsutaCARHR138200Ras-related protein Rab-25Chr4-View
Carya illinoinensisCiPaw.02G058000K07904 - Ras-related protein Rab-11A (RAB11A)Chr02+View
Carya illinoinensisCiPaw.01G107000K07904 - Ras-related protein Rab-11A (RAB11A)Chr01+View
Citrullus lanatusClCG07G016720Ras-related protein Rab-25CG_Chr07-View
Cucumis meloMELO3C017670.2Ras familychr07+View
Capsella rubellaCarub.0004s2561PTHR24073//PTHR24073:SF394 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA5B-RELATEDscaffold_4-View
Cucumis sativus L.CsaV3_4G003850Ras-related protein likechr4-View
Davidia involucrataDinv22664GWHABJS00000016+View
Durio zibethinusDuzib151G1012NW_019167904.1-View
Eucalyptus grandisEucgr.A00215Chr01+View
Erythranthe guttataMigut.N00434scaffold_14+View
Fragaria x ananassaFAN22G0141PTHR24073//PTHR24073:SF394 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA5B-RELATEDFvb4-1-View
Fragaria vescaFvH4_4g11760K07904 - Ras-related protein Rab-11A (RAB11A)Fvb4+View
Gossypium hirsutumGohir.A10G135900PTHR24073//PTHR24073:SF394 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA5B-RELATEDA10+View
Manihot esculentaManes.11G113500Chromosome11+View
Populus trichocarpaPotri.002G231800K07904 - Ras-related protein Rab-11A (RAB11A)Chr02+View
Quercus lobataQL10p04680710+View
Sechium eduleSed0012423LG02-View