Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0038266PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 [Nelumbo nucifera]Chr2-View
CSS0007265Peptidyl-prolyl cis-trans isomerase CYP40 [Morus notabilis]Chr3+View


Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicumAa31LG8G13370LG-8-View
Acer truncatumAtru.chr3.411chr3-View
Acer truncatumAtru.chr5.2808chr5-View
Actinidia chinensisActinidia36506Lachesis_group4-View
Actinidia chinensisActinidia00463Lachesis_group12+View
Avicennia marinaMSTRG.2901ScioBoG_102835_HRSCAF_103059-View
Amaranthus hybridusAh.01g020090AmaHy_arrow1_Scaffold_1+View
Amaranthus hybridusAh.02g124030AmaHy_arrow1_Scaffold_2-View
Aquilegia oxysepalaAqoxy5G01301CHR05-View
Aquilegia oxysepalaAqoxy6G01434CHR06-View
Arachis hypogaeaarahy.Tifrunner.gnm1.ann1.W8GZLXK05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)arahy.Tifrunner.gnm1.Arahy.10+View
Arabidopsis thalianaAT2G15790peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010%2C Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. SQUINT (SQN)%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide TPR2 (InterPro:IPR013105)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type%2C conserved site (InterPro:IPR020892)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3)%3B Has 20219 Blast hits to 19939 proteins in 2706 species: Archae - 114%3B Bacteria - 6925%3B Metazoa - 4764%3B Fungi - 1760%3B Plants - 1912%3B Viruses - 4%3B Other Eukaryotes - 4740 (source: NCBI BLink).Chr2-View
Beta vulgarisEL10Ac9g21823K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Chr9_EL10_PGA_scaffold8+View
Capsicum annuumCAN.G836.60PGAv.1.6.scaffold836+View
Capsicum annuumCAN.G322.31PGAv.1.6.scaffold322-View
Cannabis sativaCANSAT25G3887NC_044370.1+View
Cicer arietinum L.Ca_18663_v3Ca_LG6_v3+View
Cicer arietinum L.Ca_22195_v3Ca_LG7_v3-View
Corylus avellanaHaze_01886Similar to CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 (Arabidopsis thaliana OX%3D3702)1+View
Corylus avellanaHaze_15436Similar to CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 (Arabidopsis thaliana OX%3D3702)11-View
Coffea canephoraCc07_g05790Peptidyl-prolyl cis-trans isomerase CYP40chr7+View
Coffea canephoraCc02_g18500Peptidyl-prolyl cis-trans isomerase CYP40chr2+View
Citrus clementinaCiclev10028706m.gscaffold_8-View
Carpinus fangianaCfa003988Cfa01+View
Carpinus fangianaCfa005430Cfa02+View
Cardamine hirsutaCARHR106170Peptidyl-prolyl cis-trans isomerase BChr3-View
Carya illinoinensisCiPaw.05G054800K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Chr05-View
Carya illinoinensisCiPaw.06G142000K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Chr06+View
Carya illinoinensisCiPaw.01G022500K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Chr01-View
Citrullus lanatusClCG02G005740Peptidyl-prolyl cis-trans isomerase BCG_Chr02+View
Citrullus lanatusClCG09G017490Peptidyl-prolyl cis-trans isomerase BCG_Chr09-View
Cucumis meloMELO3C021912.2Peptidyl-prolyl cis-trans isomerasechr11+View
Cucumis meloMELO3C018433.2Peptidyl-prolyl cis-trans isomerasechr01+View
Carica papayaCpa.g.sc6.386supercontig_6-View
Carica papayaCpa.g.sc62.44supercontig_62-View
Chenopodium quinoaAUR62003847CYP40: Peptidyl-prolyl cis-trans isomerase CYP40C_Quinoa_Scaffold_2370+View
Chenopodium quinoaAUR62016632CYP40: Peptidyl-prolyl cis-trans isomerase CYP40C_Quinoa_Scaffold_3670-View
Chenopodium quinoaAUR62011429CYP40: Peptidyl-prolyl cis-trans isomerase CYP40C_Quinoa_Scaffold_3333+View
Chenopodium quinoaAUR62001959CYP40: Peptidyl-prolyl cis-trans isomerase CYP40C_Quinoa_Scaffold_4480-View
Cucumis sativus L.CsaV3_7G008790Peptidyl-prolyl cis-trans isomerasechr7-View
Cucumis sativus L.CsaV3_2G014150Peptidyl-prolyl cis-trans isomerasechr2-View
Daucus carotaDCAR_025710hypothetical proteinDCARv2_Chr7+View
Davidia involucrataDinv23590GWHABJS00000005-View
Davidia involucrataDinv42127GWHABJS00000002-View
Erigeron canadensisECA236G0775Conyza_canadensis_scaffold:3-View
Erigeron canadensisECA232G4392Conyza_canadensis_scaffold:2+View
Eucalyptus grandisEucgr.I01174Chr09-View
Erythranthe guttataMigut.H00462scaffold_8-View
Erythranthe guttataMigut.N01202scaffold_14-View
Fragaria x ananassaFAN24G0266K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Fvb2-2+View
Fragaria x ananassaFAN19G0626K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Fvb1-4+View
Fragaria x ananassaFAN15G1273K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Fvb2-4-View
Fragaria x ananassaFAN23G1324PTHR11071:SF259 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40Fvb1-3+View
Fragaria x ananassaFAN27G2452K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Fvb2-1-View
Fragaria x ananassaFAN28G0200K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Fvb1-1-View
Fragaria x ananassaFAN20G0955K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Fvb2-3+View
Fragaria x ananassaFAN26G0861PF00160//PF13181//PF13414 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_8) // TPR repeat (TPR_11)Fvb1-2+View
Fragaria vescaFvH4_1g15560K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Fvb1+View
Fragaria vescaFvH4_2g06830K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Fvb2-View
Gossypium hirsutumGohir.A13G037900PF00160//PF07719//PF13414 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11)A13+View
Gossypium hirsutumGohir.A02G159966K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)A02-View
Gossypium hirsutumGohir.A12G082500PF00160//PF13181 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_8)A12+View
Gossypium hirsutumGohir.D10G095600K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)D10+View
Gossypium hirsutumGohir.D03G020200K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)D03+View
Gossypium hirsutumGohir.A10G092800K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)A10-View
Gossypium hirsutumGohir.D02G212200PF00160//PF00515//PF07719 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2)D02+View
Gossypium hirsutumGohir.D13G036300PF00160//PF07719//PF13181 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_2) // Tetratricopeptide repeat (TPR_8)D13+View
Gossypium hirsutumGohir.A03G191300PF00160//PF00515//PF07719 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2)A03+View
Gossypium hirsutumGohir.D12G089201PTHR11071//PTHR11071:SF259 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40D12+View
Glycine maxGlyma.05G080800K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Gm05-View
Glycine maxGlyma.17G177600K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Gm17-View
Glycine maxGlyma.07G210200K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Gm07+View
Glycine maxGlyma.02G134800K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Gm02-View
Gossypium raimondiiGorai.003G021400Chr03+View
Gossypium raimondiiGorai.005G240200Chr05+View
Gossypium raimondiiGorai.011G104900Chr11+View
Gossypium raimondiiGorai.008G073900Chr08+View
Gossypium raimondiiGorai.013G041000Chr13+View
Helianthus annuusHanXRQChr14g0430681Probable peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamaseHanXRQChr14-View
Lupinus albusLalb_Chr05g0219011K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Lalb_Chr05+View
Lotus japonicusLj4g0010067K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)chr4+View
Lonicera japonicaLj4A139G82GWHAAZE00000004+View
Lonicera japonicaLj9A360G70GWHAAZE00000009-View
Lactuca sativaLsat_1_v5_gn_7_87800PF00160//PF13181 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_8)Lsat_1_v8_lg_7-View
Lactuca sativaLsat_1_v5_gn_4_168960Lsat_1_v8_lg_4-View
Magnolia biondiiMBI02_g32603_MAGBIOAED:0.19Chr02+View
Malus domesticaMD02G1167800peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamaseChr02+View
Malus domesticaMD15G1280000peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamaseChr15+View
Malus domesticaMD05G1075200peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamaseChr05+View
Manihot esculentaManes.15G143100Chromosome15-View
Medicago truncatulaMedtr8g079690peptidyl-prolyl cis-trans isomerase Dchr8+View
Medicago truncatulaMedtr4g086760peptidyl-prolyl cis-trans isomerase Dchr4-View
Nelumbo nuciferaNn5g30171chr5+View
Petunia axillarisPeaxi162Scf00016g01634Peptidyl-prolyl cis-trans isomerase DPeaxi162Scf00016+View
Petunia axillarisPeaxi162Scf00993g00331Peptidyl-prolyl cis-trans isomerase DPeaxi162Scf00993+View
Punica granatumPGR142G3372NC_045128.1+View
Prunus persicaPrupe.8G116600K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Pp08+View
Prunus persicaPrupe.7G137400K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Pp07-View
Pisum sativumPsat7g121680Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLDchr7LG7+View
Papaver somniferumPSO170G1556NC_039360.1+View
Papaver somniferumPSO675G8259NC_039358.1+View
Populus trichocarpaPotri.004G144300K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Chr04-View
Populus trichocarpaPotri.007G040100PF00160//PF00515 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_1)Chr07+View
Populus trichocarpaPotri.009G106200K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Chr09-View
Populus trichocarpaPotri.005G135500K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Chr05+View
Phaseolus vulgarisPhvul.003G246400K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Chr03-View
Phaseolus vulgarisPhvul.003G294200K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD)Chr03+View
Quercus lobataQL11p03826611-View
Quercus lobataQL06p0425236-View
Rosa chinensisRcHm_v2.0_Chr2g0104891RcHm_v2.0_Chr2+View
Rhododendron simsiiRhsim11G0168800chr11-View
Rhododendron simsiiRhsim08G0103300chr08-View
Rhododendron simsiiRhsim10G0121100chr10+View
Striga asiaticaSGA_v2.0_scaffold15G07254scaffold15+View
Salvia bowleyanaSalBow3G0531GWHASIU00000006+View
Salix brachistaSabra09G0081100GWHAAZH00000009-View
Salix brachistaSabra07G0036300GWHAAZH00000007+View
Simmondsia chinensisSc03g0001370GWHAASQ00000003+View
Sechium eduleSed0000257LG10-View
Solanum lycopersicumSolyc01g108340.3Peptidyl-prolyl cis-trans isomerase D (AHRD V3.3 *** A0A2G3BVL2_CAPCH)SL4.0ch01+View
Solanum lycopersicumSolyc02g090480.4Peptidyl-prolyl cis-trans isomerase CYP40 (AHRD V3.3 *** A0A2G3ABJ7_CAPAN)SL4.0ch02+View
Solanum pennelliiSopen01g050560SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. | SQUINT (SQN) | CONTAINS InterPro DOMAIN/s: Cyclophilin-like , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type , Tetratricopeptide-like helical , Tetratricopeptide TPR2 , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family proteinSpenn-ch01+View
Solanum pennelliiSopen02g035160SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. | SQUINT (SQN) | CONTAINS InterPro DOMAIN/s: Cyclophilin-like , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type , Tetratricopeptide-like helical , Tetratricopeptide TPR2 , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family proteinSpenn-ch02+View
Solanum tuberosumPGSC0003DMG400025806Peptidyl-prolyl cis-trans isomerase d, ppidST4.03ch01+View
Solanum tuberosumPGSC0003DMG400010060Peptidyl-prolyl cis-trans isomerase d, ppidST4.03ch02-View
Selenicereus undatusHund00322Scaffold_33678+View
Selenicereus undatusHund13574Scaffold_33679-View
Trochodendron aralioidesTAR628G1316group5-View
Trochodendron aralioidesTAR381G0616group11+View
Trochodendron aralioidesTAR625G0057group4+View
Theobroma cacaoThecc.02G096200Peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamaseChromosome_2+View
Theobroma cacaoThecc.01G051500Peptidyl-prolyl cis-trans isomerase / cyclophilin-40 / rotamaseChromosome_1+View
Tripterygium wilfordiiTWI75G0025NC_052253.1+View
Vaccinium macrocarponvmacro02177Similar to CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 (Arabidopsis thaliana OX%3D3702)chr1_Vaccinium_macrocarpon_Stevens_v1+View
Vaccinium macrocarponvmacro17928Similar to CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 (Arabidopsis thaliana OX%3D3702)chr3_Vaccinium_macrocarpon_Stevens_v1-View
Vaccinium macrocarponvmacro05320Similar to CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 (Arabidopsis thaliana OX%3D3702)chr12_Vaccinium_macrocarpon_Stevens_v1-View
Vigna mungoVMungo0251G0464CM024069.1+View
Vigna mungoVMungo0251G2020CM024069.1-View
Vitis viniferaGSVIVG01031799001chr3-View