Anchorpoints
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Carya illinoinensis | CiPaw.01G071900 | PF02892 - BED zinc finger (zf-BED) | Chr01 | + | View |
| Erigeron canadensis | ECA240G3204 | Conyza_canadensis_scaffold:5 | - | View | |
| Papaver somniferum | PSO017G0546 | NC_039362.1 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr5g0071411 | RcHm_v2.0_Chr5 | + | View | |
| Rhododendron simsii | Rhsim05G0219300 | chr05 | - | View | |
| Solanum pennellii | Sopen09g010780 | Putative AC transposase (ORFA) - Zea mays (Maize), transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. | BED zinc finger , hAT family dimerisation domain | CONTAINS InterPro DOMAIN/s: HAT dimerisation , Zinc finger, BED-type predicted | BEST Arabidopsis thaliana protein match is: BED zinc finger , hAT family dimerisation domain | Spenn-ch09 | - | View |
| Trifolium pratense | TPR.G32544 | Tp57577_TGAC_v2_LG2 | + | View |