Functional clusters

Information

  • Type InterPro
  • Description Smc1, ATP-binding cassette domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00047 5 CH_atr_401 2 2 0.0000794407
Coffea canephora chr1 5 CH_ccan_307 2 5 0.0000127767
Lupinus albus Lalb_Chr06 5 CH_lal_411 2 2 0.0000524824
Prunus persica Pp08 5 CH_ppe_666 2 3 0.00022378
Quercus lobata 9 5 CH_qlo_869 3 9 0.000000335815
Trifolium pratense Tp57577_TGAC_v2_LG1 5 CH_tpr_497 2 2 0.0000756974
Amborella trichopoda AmTr_v1.0_scaffold00047 6 CH_atr_401 2 2 0.0000794407
Coffea canephora chr1 6 CH_ccan_307 2 5 0.0000127767
Lupinus albus Lalb_Chr06 6 CH_lal_411 2 2 0.0000524824
Prunus persica Pp08 6 CH_ppe_666 2 3 0.00022378
Quercus lobata 9 6 CH_qlo_869 3 9 0.000000335815
Trifolium pratense Tp57577_TGAC_v2_LG1 6 CH_tpr_497 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001