Functional clusters
Information
- Type InterPro
- Description Class I peroxidase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC05 | 5 | CH_bca_956 | 3 | 4 | 0.00000485479 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 5 | CH_bvu_124 | 4 | 5 | 0.00000000421287 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 5 | CH_cqu_225 | 4 | 5 | 0.00000000159701 |
| Gossypium hirsutum | A08 | 5 | CH_ghi_373 | 4 | 5 | 0.00000000426827 |
| Gossypium hirsutum | D08 | 5 | CH_ghi_626 | 3 | 3 | 0.00000278063 |
| Gossypium raimondii | Chr04 | 5 | CH_gra_307 | 3 | 3 | 0.00000123302 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_353 | 5 | 31 | 0.000000136694 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 5 | CH_lsa_498 | 4 | 18 | 0.00000601062 |
| Brassica carinata | ChrC05 | 6 | CH_bca_956 | 3 | 4 | 0.00000485479 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 6 | CH_bvu_124 | 4 | 5 | 0.00000000421287 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 6 | CH_cqu_225 | 4 | 5 | 0.00000000159701 |
| Gossypium hirsutum | A08 | 6 | CH_ghi_373 | 4 | 5 | 0.00000000426827 |
| Gossypium hirsutum | D08 | 6 | CH_ghi_626 | 3 | 3 | 0.00000278063 |
| Gossypium raimondii | Chr04 | 6 | CH_gra_307 | 3 | 3 | 0.00000123302 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_353 | 5 | 31 | 0.000000136694 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 6 | CH_lsa_498 | 4 | 18 | 0.00000601062 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |