Functional clusters
Information
- Type Gene Ontology
- Description salicylic acid catabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-9 | 3 | CH_aar_126 | 3 | 14 | 0.0000181631 |
| Brassica carinata | ChrB01 | 3 | CH_bca_790 | 2 | 3 | 0.000384766 |
| Cannabis sativa | NC_044372.1 | 3 | CH_cansat_138 | 3 | 4 | 0.000000905386 |
| Capsicum annuum | PGAv.1.6.scaffold363 | 3 | CH_can_159 | 3 | 3 | 0.000000102372 |
| Citrus clementina | scaffold_6 | 3 | CH_ccl_392 | 2 | 2 | 0.000492187 |
| Cucumis sativus L. | chr4 | 3 | CH_csa_124 | 3 | 3 | 0.00000172471 |
| Cucumis sativus L. | chr6 | 3 | CH_csa_6 | 7 | 7 | 8.79841e-21 |
| Glycine max | Gm03 | 3 | CH_gma_521 | 2 | 2 | 0.00079707 |
| Lotus japonicus | chr1 | 3 | CH_lja_51 | 4 | 4 | 0.000000000230381 |
| Lonicera japonica | GWHAAZE00000002 | 3 | CH_lonja_558 | 2 | 2 | 0.000598874 |
| Malus domestica | Chr14 | 3 | CH_mdo_314 | 3 | 9 | 0.00000362253 |
| Medicago truncatula | chr7 | 3 | CH_mtr_619 | 2 | 2 | 0.000246518 |
| Prunus persica | Pp05 | 3 | CH_ppe_454 | 2 | 3 | 0.000671324 |
| Papaver somniferum | NC_039361.1 | 3 | CH_pso_624 | 2 | 2 | 0.000473117 |
| Phaseolus vulgaris | Chr01 | 3 | CH_pvu_322 | 2 | 2 | 0.000440836 |
| Solanum lycopersicum | SL4.0ch09 | 3 | CH_sly_89 | 4 | 5 | 0.0000000000424659 |
| Solanum pennellii | Spenn-ch09 | 3 | CH_spe_57 | 4 | 4 | 0.000000000033265 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_289 | 2 | 2 | 0.000278772 |
| Vitis vinifera | chr16 | 3 | CH_vvi_17 | 9 | 13 | 2.49952e-25 |
| Zea mays | 4 | 3 | CH_zma_111 | 3 | 3 | 0.000000329424 |
| Zea mays | 5 | 3 | CH_zma_132 | 3 | 5 | 0.00000131751 |
| Aethionema arabicum | LG-9 | 4 | CH_aar_126 | 3 | 14 | 0.0000181631 |
| Brassica carinata | ChrB01 | 4 | CH_bca_790 | 2 | 3 | 0.000384766 |
| Cannabis sativa | NC_044372.1 | 4 | CH_cansat_138 | 3 | 4 | 0.000000905386 |
| Capsicum annuum | PGAv.1.6.scaffold363 | 4 | CH_can_159 | 3 | 3 | 0.000000102372 |
| Citrus clementina | scaffold_6 | 4 | CH_ccl_392 | 2 | 2 | 0.000492187 |
| Cucumis sativus L. | chr4 | 4 | CH_csa_124 | 3 | 3 | 0.00000172471 |
| Cucumis sativus L. | chr6 | 4 | CH_csa_6 | 7 | 7 | 8.79841e-21 |
| Glycine max | Gm03 | 4 | CH_gma_521 | 2 | 2 | 0.00079707 |
| Lotus japonicus | chr1 | 4 | CH_lja_51 | 4 | 4 | 0.000000000230381 |
| Lonicera japonica | GWHAAZE00000002 | 4 | CH_lonja_558 | 2 | 2 | 0.000598874 |
| Malus domestica | Chr14 | 4 | CH_mdo_314 | 3 | 9 | 0.00000362253 |
| Medicago truncatula | chr7 | 4 | CH_mtr_619 | 2 | 2 | 0.000246518 |
| Prunus persica | Pp05 | 4 | CH_ppe_454 | 2 | 3 | 0.000671324 |
| Papaver somniferum | NC_039361.1 | 4 | CH_pso_624 | 2 | 2 | 0.000473117 |
| Phaseolus vulgaris | Chr01 | 4 | CH_pvu_322 | 2 | 2 | 0.000440836 |
| Solanum lycopersicum | SL4.0ch09 | 4 | CH_sly_89 | 4 | 5 | 0.0000000000424659 |
| Solanum pennellii | Spenn-ch09 | 4 | CH_spe_57 | 4 | 4 | 0.000000000033265 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_289 | 2 | 2 | 0.000278772 |
| Vitis vinifera | chr16 | 4 | CH_vvi_17 | 9 | 13 | 2.49952e-25 |
| Zea mays | 4 | 4 | CH_zma_111 | 3 | 3 | 0.000000329424 |
| Zea mays | 5 | 4 | CH_zma_132 | 3 | 5 | 0.00000131751 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |