Functional clusters
Information
- Type Gene Ontology
- Description 5'-3' DNA helicase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.04 | 3 | CH_arhy_346 | 3 | 4 | 0.00000153788 |
| Brassica napus | C09 | 3 | CH_bna_359 | 3 | 9 | 0.0000157938 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_417 | 2 | 2 | 0.000448722 |
| Fragaria x ananassa | Fvb3-2 | 3 | CH_fan_389 | 3 | 13 | 0.000119722 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_156 | 3 | 4 | 0.000000728721 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_241 | 3 | 3 | 0.000000301275 |
| Petunia axillaris | Peaxi162Scf00155 | 3 | CH_pax_300 | 2 | 2 | 0.000422134 |
| Rhododendron simsii | chr13 | 3 | CH_rsi_461 | 2 | 2 | 0.000387184 |
| Salvia bowleyana | GWHASIU00000004 | 3 | CH_sbo_109 | 4 | 13 | 0.000000000201997 |
| Salix brachista | GWHAAZH00000016 | 3 | CH_sbr_57 | 4 | 4 | 0.0000000000112607 |
| Sequoiadendron giganteum | chr7 | 3 | CH_sgi_667 | 3 | 3 | 0.000000299026 |
| Vitis vinifera | chr10 | 3 | CH_vvi_429 | 3 | 33 | 0.000943512 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.04 | 4 | CH_arhy_346 | 3 | 4 | 0.00000153788 |
| Brassica napus | C09 | 4 | CH_bna_359 | 3 | 9 | 0.0000157938 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_417 | 2 | 2 | 0.000448722 |
| Fragaria x ananassa | Fvb3-2 | 4 | CH_fan_389 | 3 | 13 | 0.000119722 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_156 | 3 | 4 | 0.000000728721 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_241 | 3 | 3 | 0.000000301275 |
| Petunia axillaris | Peaxi162Scf00155 | 4 | CH_pax_300 | 2 | 2 | 0.000422134 |
| Rhododendron simsii | chr13 | 4 | CH_rsi_461 | 2 | 2 | 0.000387184 |
| Salvia bowleyana | GWHASIU00000004 | 4 | CH_sbo_109 | 4 | 13 | 0.000000000201997 |
| Salix brachista | GWHAAZH00000016 | 4 | CH_sbr_57 | 4 | 4 | 0.0000000000112607 |
| Sequoiadendron giganteum | chr7 | 4 | CH_sgi_667 | 3 | 3 | 0.000000299026 |
| Vitis vinifera | chr10 | 4 | CH_vvi_429 | 3 | 33 | 0.000943512 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |