Functional clusters

Information

  • Type Gene Ontology
  • Description cytoskeleton organization

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Quercus lobata 7 3 CH_qlo_571 4 5 0.00000378738
Solanum lycopersicum SL4.0ch03 3 CH_sly_555 3 3 0.000715279
Trochodendron aralioides group3 3 CH_tar_473 3 3 0.00065684
Quercus lobata 7 4 CH_qlo_571 4 5 0.00000378738
Solanum lycopersicum SL4.0ch03 4 CH_sly_555 3 3 0.000715279
Trochodendron aralioides group3 4 CH_tar_473 3 3 0.00065684

Available child term results

Ontology identifier Description Number of clusters
GO:0000132 establishment of mitotic spindle orientation 2
GO:0000212 meiotic spindle organization 4
GO:0000226 microtubule cytoskeleton organization 2
GO:0007015 actin filament organization 2
GO:0007019 microtubule depolymerization 8
GO:0007051 spindle organization 2
GO:0008154 actin polymerization or depolymerization 2
GO:0010968 regulation of microtubule nucleation 20
GO:0030036 actin cytoskeleton organization 2
GO:0030042 actin filament depolymerization 14
GO:0030833 regulation of actin filament polymerization 10
GO:0030865 cortical cytoskeleton organization 16
GO:0030951 establishment or maintenance of microtubule cytoskeleton polarity 20
GO:0031023 microtubule organizing center organization 10
GO:0031109 microtubule polymerization or depolymerization 6
GO:0031116 positive regulation of microtubule polymerization 4
GO:0031117 positive regulation of microtubule depolymerization 10
GO:0034314 Arp2/3 complex-mediated actin nucleation 12
GO:0043622 cortical microtubule organization 12
GO:0045010 actin nucleation 2
GO:0051013 microtubule severing 4
GO:0051017 actin filament bundle assembly 14
GO:0051127 positive regulation of actin nucleation 2
GO:0051639 actin filament network formation 2
GO:0090063 positive regulation of microtubule nucleation 4
GO:0090306 meiotic spindle assembly 8
GO:1901673 regulation of mitotic spindle assembly 12
GO:2000694 regulation of phragmoplast microtubule organization 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001