Functional clusters
Information
- Type Gene Ontology
- Description regulation of actin filament polymerization
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold61 | 3 | CH_can_210 | 3 | 3 | 0.00000372633 |
| Lonicera japonica | GWHAAZE00000002 | 3 | CH_lonja_147 | 5 | 7 | 0.0000000000860385 |
| Sapria himalayana | scaffold14_12630789 | 3 | CH_shi_131 | 3 | 10 | 0.0000280335 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_182 | 3 | 4 | 0.0000289999 |
| Vanilla planifolia | CM028155.1 | 3 | CH_vpl_78 | 4 | 5 | 0.0000000904073 |
| Capsicum annuum | PGAv.1.6.scaffold61 | 4 | CH_can_210 | 3 | 3 | 0.00000372633 |
| Lonicera japonica | GWHAAZE00000002 | 4 | CH_lonja_147 | 5 | 7 | 0.0000000000860385 |
| Sapria himalayana | scaffold14_12630789 | 4 | CH_shi_131 | 3 | 10 | 0.0000280335 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_182 | 3 | 4 | 0.0000289999 |
| Vanilla planifolia | CM028155.1 | 4 | CH_vpl_78 | 4 | 5 | 0.0000000904073 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0034314 | Arp2/3 complex-mediated actin nucleation | 12 |
| GO:0045010 | actin nucleation | 2 |
| GO:0051127 | positive regulation of actin nucleation | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |