Functional clusters
Information
- Type Gene Ontology
- Description GARP complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group7 | 3 | CH_ach_60 | 3 | 3 | 0.000000531158 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 3 | CH_arhy_334 | 3 | 3 | 0.00000109709 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 3 | CH_arhy_335 | 3 | 3 | 0.00000109709 |
| Amborella trichopoda | AmTr_v1.0_scaffold00072 | 3 | CH_atr_335 | 2 | 3 | 0.000794407 |
| Camellia sinensis var. sinensis | Contig1196 | 3 | CH_camsi_144 | 4 | 5 | 0.000000000477224 |
| Corylus avellana | 2 | 3 | CH_cav_138 | 3 | 4 | 0.000000705324 |
| Lupinus albus | Lalb_Chr15 | 3 | CH_lal_128 | 3 | 3 | 0.000000347064 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_555 | 2 | 2 | 0.000598874 |
| Petunia axillaris | Peaxi162Scf00267 | 3 | CH_pax_343 | 2 | 2 | 0.000703556 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_430 | 4 | 5 | 0.000000000858305 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_703 | 3 | 3 | 0.000000783163 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_704 | 3 | 3 | 0.000000783163 |
| Sapria himalayana | scaffold71_2458239 | 3 | CH_shi_11 | 5 | 6 | 0.0000000000000606169 |
| Solanum tuberosum | ST4.03ch04 | 3 | CH_stu_390 | 2 | 2 | 0.0000512453 |
| Trochodendron aralioides | group9 | 3 | CH_tar_497 | 2 | 2 | 0.000900549 |
| Actinidia chinensis | Lachesis_group7 | 4 | CH_ach_60 | 3 | 3 | 0.000000531158 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 4 | CH_arhy_334 | 3 | 3 | 0.00000109709 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 4 | CH_arhy_335 | 3 | 3 | 0.00000109709 |
| Amborella trichopoda | AmTr_v1.0_scaffold00072 | 4 | CH_atr_335 | 2 | 3 | 0.000794407 |
| Camellia sinensis var. sinensis | Contig1196 | 4 | CH_camsi_144 | 4 | 5 | 0.000000000477224 |
| Corylus avellana | 2 | 4 | CH_cav_138 | 3 | 4 | 0.000000705324 |
| Lupinus albus | Lalb_Chr15 | 4 | CH_lal_128 | 3 | 3 | 0.000000347064 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_555 | 2 | 2 | 0.000598874 |
| Petunia axillaris | Peaxi162Scf00267 | 4 | CH_pax_343 | 2 | 2 | 0.000703556 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_430 | 4 | 5 | 0.000000000858305 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_703 | 3 | 3 | 0.000000783163 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_704 | 3 | 3 | 0.000000783163 |
| Sapria himalayana | scaffold71_2458239 | 4 | CH_shi_11 | 5 | 6 | 0.0000000000000606169 |
| Solanum tuberosum | ST4.03ch04 | 4 | CH_stu_390 | 2 | 2 | 0.0000512453 |
| Trochodendron aralioides | group9 | 4 | CH_tar_497 | 2 | 2 | 0.000900549 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |