Functional clusters

Information

  • Type Gene Ontology
  • Description rDNA heterochromatin assembly

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 3 CH_arhy_307 3 6 0.000000537712
Brassica carinata ChrC05 3 CH_bca_63 4 5 0.00000000000219781
Brassica carinata ChrB06 3 CH_bca_750 2 2 0.000320646
Brassica napus A05 3 CH_bna_467 2 2 0.00011137
Brassica oleracea C5 3 CH_bol_241 2 2 0.0000326861
Brassica rapa A05 3 CH_bra_162 2 2 0.0000429314
Manihot esculenta Chromosome04 3 CH_mes_279 2 2 0.0000610631
Trochodendron aralioides group0 3 CH_tar_321 2 3 0.000180104
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 4 CH_arhy_307 3 6 0.000000537712
Brassica carinata ChrC05 4 CH_bca_63 4 5 0.00000000000219781
Brassica carinata ChrB06 4 CH_bca_750 2 2 0.000320646
Brassica napus A05 4 CH_bna_467 2 2 0.00011137
Brassica oleracea C5 4 CH_bol_241 2 2 0.0000326861
Brassica rapa A05 4 CH_bra_162 2 2 0.0000429314
Manihot esculenta Chromosome04 4 CH_mes_279 2 2 0.0000610631
Trochodendron aralioides group0 4 CH_tar_321 2 3 0.000180104

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001