Functional clusters

Information

  • Type MapMan
  • Description Coenzyme metabolism.iron-sulfur cluster assembly machinery.mitochondrial ISC system.assembly phase.scaffold protein (ISU)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 1 CH_amhyb_254 2 3 0.000757523
Malus domestica Chr13 1 CH_mdo_685 2 2 0.000568817
Medicago truncatula chr3 1 CH_mtr_526 2 2 0.0000410863
Rhododendron simsii chr08 1 CH_rsi_439 2 2 0.000193592
Striga asiatica scaffold90 1 CH_sas_137 3 40 0.000577937
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_397 2 3 0.00083625
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 2 CH_amhyb_254 2 3 0.000757523
Malus domestica Chr13 2 CH_mdo_685 2 2 0.000568817
Rhododendron simsii chr08 2 CH_rsi_439 2 2 0.000193592
Striga asiatica scaffold90 2 CH_sas_137 3 40 0.000577937
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_397 2 3 0.00083625

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001