Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g018250 Solanum pennellii HOM05D015862 ORTHO05D010659 2.4e-128 462.2 237 100.0
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 2.7e-63 246.1 188 65.4
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 2.7e-63 246.1 188 65.4
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 2.7e-63 246.1 188 65.4
Cc00_g01740 Coffea canephora HOM05D009000 ORTHO05D010659 5.0e-46 188.7 186 57.0
Sopen06g007660 Solanum pennellii HOM05D008609 ORTHO05D014791 4.9e-41 172.2 108 82.4
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 1.1e-32 144.4 132 60.6
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 6.2e-28 128.6 165 44.8
Nitab4.5_0000866g0150 Nicotiana tabacum HOM05D003467 ORTHO05D010659 2.9e-25 119.8 110 60.9
SalBow1G2933 Salvia bowleyana HOM05D009000 ORTHO05D010659 4.4e-18 95.9 116 49.1
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.6e-18 95.1 157 42.7
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 1.6e-15 87.4 140 39.3
Glyma.15G187633 Glycine max HOM05D015862 ORTHO05D010659 3.5e-15 86.3 130 44.6
Glyma.15G187901 Glycine max HOM05D015862 ORTHO05D010659 3.5e-15 86.3 130 44.6
Cc00_g01660 Coffea canephora HOM05D009000 ORTHO05D010659 4.6e-15 85.9 179 35.2
Sc08g0004800 Simmondsia chinensis HOM05D004291 ORTHO05D005620 1.0e-14 84.7 137 43.1
LjContig00439g0013523 Lotus japonicus HOM05D009000 ORTHO05D010659 1.3e-14 84.3 121 43.0
LjContig00315g0010124 Lotus japonicus HOM05D009000 ORTHO05D010659 3.9e-14 82.8 122 41.8
unitig_87.g27989 Utricularia gibba HOM05D015862 ORTHO05D010659 1.5e-13 80.9 137 39.4
FAN20G1765 Fragaria x ananassa HOM05D009000 ORTHO05D010659 1.9e-13 80.5 109 41.3
ECA039G0025 Erigeron canadensis HOM05D000743 ORTHO05D000580 2.5e-13 80.1 174 36.2
Lsat_1_v5_gn_5_17721 Lactuca sativa HOM05D009000 ORTHO05D010659 3.3e-13 79.7 156 33.3
HanXRQMTg0579591 Helianthus annuus HOM05D009000 ORTHO05D010659 7.3e-13 78.6 203 32.5
Lsat_1_v5_gn_0_43360 Lactuca sativa HOM05D000743 ORTHO05D000580 1.6e-12 77.4 185 32.4
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 3.6e-12 76.3 156 40.4
Sopen00g002670 Solanum pennellii HOM05D009000 ORTHO05D010659 1.1e-11 74.7 149 35.6
Solyc00g500102.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.4e-11 74.3 113 41.6
Solyc00g500119.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.4e-11 74.3 113 41.6
Solyc00g500276.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.4e-11 74.3 113 41.6
Solyc00g500360.1 Solanum lycopersicum HOM05D004291 ORTHO05D010659 1.4e-11 74.3 113 41.6
Sopen00g002740 Solanum pennellii HOM05D004291 ORTHO05D005620 1.4e-11 74.3 113 41.6
CAN.G1159.2 Capsicum annuum HOM05D009000 ORTHO05D010659 3.1e-11 73.2 170 35.3
CAN.G1673.8 Capsicum annuum HOM05D009000 ORTHO05D010659 4.0e-11 72.8 155 36.8
Gorai.001G167200 Gossypium raimondii HOM05D009000 ORTHO05D010659 2.0e-10 70.5 131 36.6
Solyc00g500260.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 2.0e-10 70.5 143 35.0
Solyc00g500362.1 Solanum lycopersicum HOM05D002864 ORTHO05D008485 2.0e-10 70.5 143 35.0
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 2.6e-10 70.1 189 31.2
Solyc00g500312.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 2.6e-10 70.1 143 35.0
unitig_87.g27977 Utricularia gibba HOM05D009000 ORTHO05D010659 4.9e-09 65.9 115 37.4
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 6.4e-09 65.5 179 30.7
Manes.09G035001 Manihot esculenta HOM05D015862 ORTHO05D010659 3.2e-08 63.2 105 38.1
Nitab4.5_0014136g0030 Nicotiana tabacum HOM05D009000 ORTHO05D010659 5.4e-08 62.4 142 35.9
Psat7g093400 Pisum sativum HOM05D000743 ORTHO05D000580 2.1e-07 60.5 109 35.8
VMungo1309G3000 Vigna mungo HOM05D009000 ORTHO05D010659 1.7e-06 57.4 123 35.0

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (6 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (2 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (1 genes)
Glycine max (2 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (3 genes)
Lonicera japonica (0 genes)
Lotus japonicus (4 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (3 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (7 genes)
Solanum pennellii (4 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (2 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings