Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g032140.1 Solanum lycopersicum HOM05D001081 ORTHO05D003320 3.0e-57 224.9 111 100.0
Nitab4.5_0000548g0100 Nicotiana tabacum HOM05D001081 ORTHO05D003320 1.5e-21 106.3 124 49.2
Nitab4.5_0006933g0020 Nicotiana tabacum HOM05D001081 ORTHO05D003320 3.4e-21 105.1 124 49.2
Solyc03g083170.3 Solanum lycopersicum HOM05D001081 ORTHO05D003320 1.5e-16 89.7 233 30.9
Solyc03g071790.1 Solanum lycopersicum HOM05D001081 ORTHO05D003320 9.0e-14 80.5 234 30.8
Sopen03g019410 Solanum pennellii HOM05D001081 ORTHO05D003320 2.0e-13 79.3 54 68.5
Sopen03g022960 Solanum pennellii HOM05D001081 ORTHO05D003320 3.8e-12 75.1 234 26.9
Dinv35338 Davidia involucrata HOM05D001081 ORTHO05D003320 8.5e-12 73.9 54 63.0
Peaxi162Scf00618g00337 Petunia axillaris HOM05D001081 ORTHO05D003320 8.5e-12 73.9 226 26.5
Peaxi162Scf00740g00139 Petunia axillaris HOM05D001081 ORTHO05D003320 1.4e-11 73.2 230 28.3
Solyc03g071800.2 Solanum lycopersicum HOM05D001081 ORTHO05D003320 1.4e-11 73.2 54 66.7
Sopen03g022630 Solanum pennellii HOM05D001081 ORTHO05D003320 1.4e-11 73.2 54 63.0
Sopen03g022940 Solanum pennellii HOM05D001081 ORTHO05D003320 1.4e-11 73.2 54 63.0
Solyc03g083210.3 Solanum lycopersicum HOM05D001081 ORTHO05D003320 1.9e-11 72.8 234 26.9
FAN06G1778 Fragaria x ananassa HOM05D001081 ORTHO05D004708 2.5e-11 72.4 115 37.4
vmacro10123 Vaccinium macrocarpon HOM05D001081 ORTHO05D003320 5.5e-11 71.2 54 61.1
Dinv29277 Davidia involucrata HOM05D001081 ORTHO05D003320 7.2e-11 70.9 54 59.3
PGR044G2718 Punica granatum HOM05D001081 ORTHO05D003320 9.4e-11 70.5 54 55.6
Duzib084G0071 Durio zibethinus HOM05D001081 ORTHO05D003320 1.2e-10 70.1 54 55.6
QL09p008921 Quercus lobata HOM05D001081 ORTHO05D003320 1.2e-10 70.1 56 57.1
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 2.1e-10 69.3 56 57.1
Lj3A904G78 Lonicera japonica HOM05D001081 ORTHO05D003320 2.7e-10 68.9 54 55.6
Nitab4.5_0000015g0280 Nicotiana tabacum HOM05D001081 ORTHO05D003320 2.7e-10 68.9 54 55.6
Atru.chr12.2212 Acer truncatum HOM05D001081 ORTHO05D003320 3.6e-10 68.6 54 59.3
Migut.F01028 Erythranthe guttata HOM05D001081 ORTHO05D003320 3.6e-10 68.6 54 57.4
Solyc06g051990.4 Solanum lycopersicum HOM05D001081 ORTHO05D003320 3.6e-10 68.6 54 57.4
CAN.G481.12 Capsicum annuum HOM05D001081 ORTHO05D003320 4.6e-10 68.2 235 26.8
Nitab4.5_0009932g0030 Nicotiana tabacum HOM05D001081 ORTHO05D003320 4.6e-10 68.2 54 53.7
Psat5g076960 Pisum sativum HOM05D001081 ORTHO05D003320 4.6e-10 68.2 158 27.8
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 6.1e-10 67.8 53 56.6
Rhsim09G0205800 Rhododendron simsii HOM05D001081 ORTHO05D003320 6.1e-10 67.8 54 57.4
Sopen06g018050 Solanum pennellii HOM05D001081 ORTHO05D003320 6.1e-10 67.8 54 57.4
CiPaw.06G046100 Carya illinoinensis HOM05D001081 ORTHO05D003320 7.9e-10 67.4 53 56.6
CSS0034499 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D003320 1.0e-09 67.0 54 57.4
Lj6g0010658 Lotus japonicus HOM05D001081 ORTHO05D003320 1.0e-09 67.0 54 53.7
Potri.012G016000 Populus trichocarpa HOM05D001081 ORTHO05D003320 1.0e-09 67.0 54 53.7
Potri.015G012600 Populus trichocarpa HOM05D001081 ORTHO05D003320 1.0e-09 67.0 54 53.7
CAN.G481.9 Capsicum annuum HOM05D001081 ORTHO05D003320 1.4e-09 66.6 231 26.8
FAN03G1268 Fragaria x ananassa HOM05D001081 ORTHO05D003320 1.4e-09 66.6 54 55.6
FAN10G0061 Fragaria x ananassa HOM05D001081 ORTHO05D003320 1.4e-09 66.6 54 55.6
FAN10G4108 Fragaria x ananassa HOM05D001081 ORTHO05D003320 1.4e-09 66.6 54 55.6
Hma1.2p1_0404F.1_g145400 Hydrangea macrophylla HOM05D001081 ORTHO05D003320 1.4e-09 66.6 54 55.6
Lj1g0021086 Lotus japonicus HOM05D001081 ORTHO05D003320 1.4e-09 66.6 54 53.7
Lj1g0024637 Lotus japonicus HOM05D001081 ORTHO05D003320 1.4e-09 66.6 54 55.6
Sed0011102 Sechium edule HOM05D001081 ORTHO05D003320 1.4e-09 66.6 54 57.4
TAR375G0704 Trochodendron aralioides HOM05D001081 ORTHO05D003320 1.4e-09 66.6 54 55.6
CSS0050389 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D003320 1.8e-09 66.2 54 57.4
Lalb_Chr11g0066881 Lupinus albus HOM05D001081 ORTHO05D003320 1.8e-09 66.2 54 53.7
Oeu040723.1 Olea europaea HOM05D001081 ORTHO05D003320 1.8e-09 66.2 54 51.9
QL09p008790 Quercus lobata HOM05D001081 ORTHO05D003320 1.8e-09 66.2 56 55.4
Glyma.04G235500 Glycine max HOM05D001081 ORTHO05D003320 2.3e-09 65.9 54 53.7
Medtr3g491560 Medicago truncatula HOM05D001081 ORTHO05D003320 2.3e-09 65.9 54 51.9
Actinidia06147 Actinidia chinensis HOM05D001081 ORTHO05D003320 3.0e-09 65.5 232 25.4
Haze_05841 Corylus avellana HOM05D001081 ORTHO05D003320 3.0e-09 65.5 56 53.6
MELO3C005887.2 Cucumis melo HOM05D001081 ORTHO05D003320 3.0e-09 65.5 54 53.7
CsaV3_5G000480 Cucumis sativus L. HOM05D001081 ORTHO05D003320 3.0e-09 65.5 54 53.7
Duzib068G0185 Durio zibethinus HOM05D001081 ORTHO05D003320 3.0e-09 65.5 54 51.9
Sed0016547 Sechium edule HOM05D001081 ORTHO05D003320 3.0e-09 65.5 54 51.9
GSVIVG01038554001 Vitis vinifera HOM05D001081 ORTHO05D003320 3.0e-09 65.5 54 51.9
FvH4_7g31551 Fragaria vesca HOM05D001081 ORTHO05D003320 5.1e-09 64.7 54 53.7
Psat5g076840 Pisum sativum HOM05D001081 ORTHO05D003320 5.1e-09 64.7 54 51.9
Prupe.2G309700 Prunus persica HOM05D001081 ORTHO05D003320 6.7e-09 64.3 54 51.9
Rhsim03G0209000 Rhododendron simsii HOM05D001081 ORTHO05D003320 6.7e-09 64.3 54 53.7
RcHm_v2.0_Chr1g0380541 Rosa chinensis HOM05D001081 ORTHO05D003320 6.7e-09 64.3 54 51.9
Sopen11g015170 Solanum pennellii HOM05D001081 ORTHO05D003320 6.7e-09 64.3 54 59.3
MSTRG.51 Avicennia marina HOM05D001081 ORTHO05D003320 8.8e-09 63.9 54 51.9
EL10Ac3g05280 Beta vulgaris HOM05D001081 ORTHO05D003320 8.8e-09 63.9 56 50.0
Eucgr.H02781 Eucalyptus grandis HOM05D001081 ORTHO05D003320 8.8e-09 63.9 54 51.9
Lj1g0004421 Lotus japonicus HOM05D001081 ORTHO05D003320 8.8e-09 63.9 54 53.7
Oeu041053.1 Olea europaea HOM05D001081 ORTHO05D003320 8.8e-09 63.9 53 52.8
Phvul.009G052300 Phaseolus vulgaris HOM05D001081 ORTHO05D003320 8.8e-09 63.9 54 53.7
SHI02369 Sapria himalayana HOM05D001081 ORTHO05D003320 8.8e-09 63.9 56 53.6
Cc09_g00180 Coffea canephora HOM05D001081 ORTHO05D003320 1.1e-08 63.5 54 53.7
HanXRQChr08g0225261 Helianthus annuus HOM05D001081 ORTHO05D003320 1.1e-08 63.5 54 53.7
Manes.10G072000 Manihot esculenta HOM05D001081 ORTHO05D003320 1.1e-08 63.5 54 51.9
Manes.17G027400 Manihot esculenta HOM05D001081 ORTHO05D003320 1.1e-08 63.5 54 51.9
HanXRQChr04g0100491 Helianthus annuus HOM05D001081 ORTHO05D003320 1.5e-08 63.2 54 51.9
MD01G1218300 Malus domestica HOM05D001081 ORTHO05D003320 1.5e-08 63.2 54 50.0
arahy.Tifrunner.gnm1.ann1.8V1LLT Arachis hypogaea HOM05D001081 ORTHO05D003320 1.9e-08 62.8 54 51.9
arahy.Tifrunner.gnm1.ann1.SS9NKM Arachis hypogaea HOM05D001081 ORTHO05D003320 1.9e-08 62.8 54 51.9
CSS0030903 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D003320 1.9e-08 62.8 54 55.6
Ciclev10011757m.g Citrus clementina HOM05D001081 ORTHO05D003320 1.9e-08 62.8 54 55.6
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 1.9e-08 62.8 54 51.9
Aqoxy7G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D003320 2.5e-08 62.4 54 50.0
Eucgr.H00020 Eucalyptus grandis HOM05D001081 ORTHO05D003320 2.5e-08 62.4 54 50.0
Os01g0235200 Oryza sativa ssp. japonica HOM05D001081 ORTHO05D003320 2.5e-08 62.4 54 50.0
Sc25g0000900 Simmondsia chinensis HOM05D001081 ORTHO05D003320 3.3e-08 62.0 54 48.1
VMungo1309G1923 Vigna mungo HOM05D001081 ORTHO05D003320 3.3e-08 62.0 54 48.1
Aqoxy5G02855 Aquilegia oxysepala HOM05D001081 ORTHO05D003320 5.7e-08 61.2 54 51.9
MSTRG.8651 Avicennia marina HOM05D001081 ORTHO05D003320 5.7e-08 61.2 54 50.0
CiPaw.02G041300 Carya illinoinensis HOM05D001081 ORTHO05D003320 5.7e-08 61.2 54 50.0
Ca_16709_v3 Cicer arietinum L. HOM05D001081 ORTHO05D003320 5.7e-08 61.2 54 48.1
Gohir.D12G250500 Gossypium hirsutum HOM05D001081 ORTHO05D003320 5.7e-08 61.2 54 51.9
Gorai.008G268600 Gossypium raimondii HOM05D001081 ORTHO05D003320 5.7e-08 61.2 54 51.9
Nn1g00259 Nelumbo nucifera HOM05D001081 ORTHO05D003320 5.7e-08 61.2 54 50.0
Rhsim06G0231600 Rhododendron simsii HOM05D001081 ORTHO05D003320 5.7e-08 61.2 54 51.9
Rhsim06G0232000 Rhododendron simsii HOM05D001081 ORTHO05D003320 5.7e-08 61.2 54 51.9
SGA_v2.0_scaffold55G19771 Striga asiatica HOM05D001081 ORTHO05D003320 5.7e-08 61.2 54 51.9
Migut.F00210 Erythranthe guttata HOM05D001081 ORTHO05D003320 7.4e-08 60.8 54 46.3
HanXRQChr03g0071171 Helianthus annuus HOM05D001081 ORTHO05D003320 7.4e-08 60.8 54 51.9
Lj1g0014928 Lotus japonicus HOM05D001081 ORTHO05D003320 7.4e-08 60.8 54 50.0
Lalb_Chr08g0240221 Lupinus albus HOM05D001081 ORTHO05D003320 7.4e-08 60.8 56 46.4
TPR.G3709 Trifolium pratense HOM05D001081 ORTHO05D003320 7.4e-08 60.8 54 48.1
TWI14G0383 Tripterygium wilfordii HOM05D001081 ORTHO05D003320 7.4e-08 60.8 54 50.0
CANSAT21G1954 Cannabis sativa HOM05D001081 ORTHO05D003320 9.7e-08 60.5 54 48.1
Gohir.A12G249700 Gossypium hirsutum HOM05D001081 ORTHO05D003320 9.7e-08 60.5 54 50.0
vmacro22637 Vaccinium macrocarpon HOM05D001081 ORTHO05D003320 9.7e-08 60.5 54 51.9
MD07G1288200 Malus domestica HOM05D001081 ORTHO05D003320 1.3e-07 60.1 54 46.3
unitig_747.g21743 Utricularia gibba HOM05D001081 ORTHO05D003320 1.3e-07 60.1 54 44.4
Lsat_1_v5_gn_8_5221 Lactuca sativa HOM05D001081 ORTHO05D003320 2.2e-07 59.3 53 50.9
Solyc03g071820.2 Solanum lycopersicum HOM05D001081 ORTHO05D003320 2.2e-07 59.3 55 52.7
CsaV3_3G019830 Cucumis sativus L. HOM05D001081 ORTHO05D003320 2.8e-07 58.9 54 46.3
DCAR_010599 Daucus carota HOM05D001081 ORTHO05D003320 2.8e-07 58.9 54 46.3
ECA238G1287 Erigeron canadensis HOM05D001081 ORTHO05D003320 2.8e-07 58.9 54 46.3
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 3.7e-07 58.5 54 50.0
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 4.8e-07 58.2 59 42.4
ATR0602G220 Amborella trichopoda HOM05D001081 ORTHO05D003320 6.3e-07 57.8 54 44.4
CDE03G0337 Ceratophyllum demersum HOM05D001081 ORTHO05D003320 1.1e-06 57.0 54 46.3
CsaV3_1G033480 Cucumis sativus L. HOM05D001081 ORTHO05D003320 1.1e-06 57.0 54 44.4
Glyma.06G129200 Glycine max HOM05D001081 ORTHO05D003320 1.1e-06 57.0 54 48.1
ECA233G1076 Erigeron canadensis HOM05D001081 ORTHO05D003320 1.4e-06 56.6 54 46.3
SalBow2G1109 Salvia bowleyana HOM05D001081 ORTHO05D003320 1.4e-06 56.6 51 49.0
Thecc.03G199400 Theobroma cacao HOM05D001081 ORTHO05D003320 1.4e-06 56.6 54 44.4
Zm00001eb119030 Zea mays HOM05D001081 ORTHO05D003320 1.8e-06 56.2 54 42.6
Zm00001eb182960 Zea mays HOM05D001081 ORTHO05D003320 1.8e-06 56.2 143 24.5
Zm00001eb217050 Zea mays HOM05D001081 ORTHO05D003320 1.8e-06 56.2 54 42.6
Lj1g0018421 Lotus japonicus HOM05D001081 ORTHO05D003320 2.4e-06 55.8 54 42.6
Potri.002G172000 Populus trichocarpa HOM05D001081 ORTHO05D003320 2.4e-06 55.8 54 46.3
Sabra12G0016100 Salix brachista HOM05D001081 ORTHO05D003320 2.4e-06 55.8 48 52.1
MBI07_g37059_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D003320 3.1e-06 55.5 49 46.9
THA.LOC104798900 Tarenaya hassleriana HOM05D001081 ORTHO05D003320 3.1e-06 55.5 54 46.3
TWI23G0785 Tripterygium wilfordii HOM05D001081 ORTHO05D003320 3.1e-06 55.5 54 48.1
Haze_15669 Corylus avellana HOM05D001081 ORTHO05D003320 4.1e-06 55.1 56 44.6
Manes.01G245700 Manihot esculenta HOM05D001081 ORTHO05D003320 4.1e-06 55.1 54 46.3
Medtr7g117665 Medicago truncatula HOM05D001081 ORTHO05D003320 4.1e-06 55.1 54 40.7
CARHR158090 Cardamine hirsuta HOM05D001081 ORTHO05D003320 5.3e-06 54.7 54 44.4
MELO3C008498.2 Cucumis melo HOM05D001081 ORTHO05D003320 5.3e-06 54.7 54 44.4
Sed0025154 Sechium edule HOM05D001081 ORTHO05D003320 6.9e-06 54.3 53 45.3

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (4 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (3 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (6 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (3 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (0 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (4 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (0 genes)
Sechium edule (3 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (7 genes)
Solanum pennellii (6 genes)
Solanum tuberosum (0 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (0 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (3 genes)

Program Settings