Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold80G25827 Striga asiatica HOM05D016832 ORTHO05D000044 2.6e-172 608.6 308 100.0
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 9.9e-10 68.6 58 55.2
SGA_v2.0_scaffold28G11732 Striga asiatica HOM05D056663 ORTHO05D011213 1.3e-09 68.2 48 58.3
SGA_v2.0_scaffold298G47652 Striga asiatica HOM05D016832 ORTHO05D000004 1.3e-09 68.2 158 28.5
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 3.7e-09 66.6 58 48.3
Nn4g22089 Nelumbo nucifera HOM05D000003 ORTHO05D000004 4.9e-09 66.2 80 41.2
SGA_v2.0_scaffold102G29912 Striga asiatica HOM05D016832 ORTHO05D402802 4.9e-09 66.2 116 31.9
SGA_v2.0_scaffold154G37091 Striga asiatica HOM05D016832 ORTHO05D000044 4.9e-09 66.2 138 26.8
Nn1g09365 Nelumbo nucifera HOM05D000003 ORTHO05D000004 8.3e-09 65.5 59 49.2
SGA_v2.0_scaffold94G28593 Striga asiatica HOM05D016832 ORTHO05D000004 1.9e-08 64.3 52 53.8
SGA_v2.0_scaffold299G47717 Striga asiatica HOM05D000003 ORTHO05D000004 3.2e-08 63.5 58 43.1
SGA_v2.0_scaffold23G10182 Striga asiatica HOM05D010565 ORTHO05D011213 7.1e-08 62.4 71 40.8
Nn6g35689 Nelumbo nucifera HOM05D000003 ORTHO05D000004 9.2e-08 62.0 61 47.5
SGA_v2.0_scaffold61G21264 Striga asiatica HOM05D017438 ORTHO05D000004 1.2e-07 61.6 58 43.1
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-07 61.2 57 49.1
SGA_v2.0_scaffold275G46581 Striga asiatica HOM05D000003 ORTHO05D000004 2.1e-07 60.8 61 47.5
Atru.chr6.710 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-07 60.1 115 34.8
Nn1g02030 Nelumbo nucifera HOM05D000003 ORTHO05D004093 4.6e-07 59.7 49 51.0
SGA_v2.0_scaffold382G50402 Striga asiatica HOM05D000003 ORTHO05D000004 4.6e-07 59.7 52 50.0
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.3e-06 58.2 134 25.4
SGA_v2.0_scaffold191G40478 Striga asiatica HOM05D000047 ORTHO05D000044 1.3e-06 58.2 57 43.9
SGA_v2.0_scaffold241G44220 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-06 58.2 59 40.7
TAR256G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.3e-06 58.2 72 43.1
Rhsim01G0076000 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-06 57.8 89 36.0
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-06 57.8 132 26.5
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-06 57.8 49 51.0
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 1.7e-06 57.8 83 36.1
Atru.chr12.2439 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 57.4 93 33.3
Atru.chr8.816 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 57.4 109 34.9
QL07p038559 Quercus lobata HOM05D000003 ORTHO05D000167 3.9e-06 56.6 62 41.9
TWI09G0223 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.9e-06 56.6 64 32.8

Acer truncatum (3 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (4 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (1 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (18 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings