Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold296G47573 Striga asiatica HOM05D000030 ORTHO05D000009 2.5e-113 412.1 215 100.0
SGA_v2.0_scaffold2G01199 Striga asiatica HOM05D000030 ORTHO05D000009 1.1e-55 220.7 232 59.5
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 2.6e-17 93.2 312 28.8
RcHm_v2.0_Chr5g0007101 Rosa chinensis HOM05D000030 ORTHO05D000031 2.1e-14 83.6 276 29.3
RcHm_v2.0_Chr6g0283851 Rosa chinensis HOM05D000030 ORTHO05D000031 2.3e-13 80.1 225 32.0
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 6.7e-13 78.6 321 27.1
RcHm_v2.0_Chr5g0035131 Rosa chinensis HOM05D000030 ORTHO05D000009 8.1e-11 71.6 89 43.8
RcHm_v2.0_Chr6g0251881 Rosa chinensis HOM05D000030 ORTHO05D000009 9.0e-10 68.2 299 25.4
RcHm_v2.0_Chr7g0235371 Rosa chinensis HOM05D000030 ORTHO05D000009 5.8e-09 65.5 86 41.9
RcHm_v2.0_Chr2g0142391 Rosa chinensis HOM05D000030 ORTHO05D000031 1.3e-08 64.3 112 42.0
FvH4_4g06882 Fragaria vesca HOM05D000030 ORTHO05D000031 6.4e-08 62.0 325 24.3
Lj2C73T8 Lonicera japonica HOM05D011311 ORTHO05D000009 3.2e-07 59.7 52 55.8
RcHm_v2.0_Chr6g0289081 Rosa chinensis HOM05D000030 ORTHO05D000031 3.2e-07 59.7 83 34.9
FvH4_2g26902 Fragaria vesca HOM05D000030 ORTHO05D000009 4.2e-07 59.3 90 41.1
RcHm_v2.0_Chr3g0467291 Rosa chinensis HOM05D000030 ORTHO05D000009 4.2e-07 59.3 86 38.4
RcHm_v2.0_Chr7g0242101 Rosa chinensis HOM05D000030 ORTHO05D000031 3.5e-06 56.2 255 22.4
Atru.chr13.1603 Acer truncatum HOM05D000030 ORTHO05D000009 4.6e-06 55.8 79 43.0
Atru.chr6.1301 Acer truncatum HOM05D000030 ORTHO05D000009 4.6e-06 55.8 79 43.0
Atru.chr12.2535 Acer truncatum HOM05D000030 ORTHO05D000009 7.9e-06 55.1 76 42.1

Acer truncatum (3 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (3 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (1 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (10 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings