Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
SGA_v2.0_scaffold245G44786	Striga asiatica	HOM05D008014	ORTHO05D016193	3.5e-183	644.8	321	100.0
SGA_v2.0_scaffold255G45341	Striga asiatica	HOM05D000003	ORTHO05D000006	1.0e-25	121.7	96	57.3
Atru.chr7.622	Acer truncatum	HOM05D000003	ORTHO05D000004	2.1e-15	87.4	108	38.9
COL.COLO4_27142	Corchorus olitorius	HOM05D000003	ORTHO05D000006	2.1e-15	87.4	118	37.3
Atru.chr1.1302	Acer truncatum	HOM05D000003	ORTHO05D000004	2.8e-15	87.0	106	41.5
TWI56G0972	Tripterygium wilfordii	HOM05D000003	ORTHO05D000006	3.6e-15	86.7	109	40.4
Atru.chr2.1277	Acer truncatum	HOM05D000003	ORTHO05D000006	8.1e-15	85.5	110	40.0
Sabra08G0134900	Salix brachista	HOM05D000003	ORTHO05D000006	8.1e-15	85.5	99	39.4
TWI38G1591	Tripterygium wilfordii	HOM05D000003	ORTHO05D000006	8.1e-15	85.5	141	31.2
Atru.chr2.1761	Acer truncatum	HOM05D000003	ORTHO05D000004	1.4e-14	84.7	108	38.0
COL.COLO4_10338	Corchorus olitorius	HOM05D000003	ORTHO05D000006	1.4e-14	84.7	107	36.4
TWI38G0333	Tripterygium wilfordii	HOM05D000003	ORTHO05D000004	2.4e-14	84.0	127	33.1
Atru.chr1.2428	Acer truncatum	HOM05D000003	ORTHO05D000004	3.1e-14	83.6	108	36.1
Sabra04G0049100	Salix brachista	HOM05D000003	ORTHO05D000007	3.1e-14	83.6	189	29.1
TWI81G0242	Tripterygium wilfordii	HOM05D000003	ORTHO05D000004	5.3e-14	82.8	105	39.0
Sabra15G0091800	Salix brachista	HOM05D000003	ORTHO05D000007	9.0e-14	82.0	99	37.4
Atru.chr2.451	Acer truncatum	HOM05D000003	ORTHO05D000004	1.2e-13	81.6	115	38.3
Atru.chr2.669	Acer truncatum	HOM05D000003	ORTHO05D000004	1.2e-13	81.6	98	37.8
Atru.chr4.30	Acer truncatum	HOM05D000003	ORTHO05D000004	1.2e-13	81.6	102	38.2
Atru.chr10.81	Acer truncatum	HOM05D000003	ORTHO05D000004	1.5e-13	81.3	106	38.7
Lj3g0003086	Lotus japonicus	HOM05D000003	ORTHO05D000006	3.4e-13	80.1	109	38.5
Atru.chr10.857	Acer truncatum	HOM05D000003	ORTHO05D000004	4.5e-13	79.7	102	39.2
Atru.chr10.1301	Acer truncatum	HOM05D000003	ORTHO05D000006	7.6e-13	79.0	108	35.2
FvH4_3g33091	Fragaria vesca	HOM05D000003	ORTHO05D000022	7.6e-13	79.0	104	35.6
PGR119G2417	Punica granatum	HOM05D000003	ORTHO05D000004	7.6e-13	79.0	110	37.3
Atru.chr1.1904	Acer truncatum	HOM05D000003	ORTHO05D000004	1.3e-12	78.2	114	38.6
Thecc.09G345900	Theobroma cacao	HOM05D000003	ORTHO05D016193	1.3e-12	78.2	107	33.6
Sabra09G0015300	Salix brachista	HOM05D000003	ORTHO05D000006	1.7e-12	77.8	93	38.7
Manes.07G041771	Manihot esculenta	HOM05D000003	ORTHO05D000006	2.9e-12	77.0	103	35.9
Manes.17G070550	Manihot esculenta	HOM05D000003	ORTHO05D000006	3.8e-12	76.6	146	30.1
Atru.chr1.3365	Acer truncatum	HOM05D000003	ORTHO05D000004	6.4e-12	75.9	97	36.1
Atru.chr10.629	Acer truncatum	HOM05D000003	ORTHO05D000004	6.4e-12	75.9	104	36.5
Manes.13G022150	Manihot esculenta	HOM05D000003	ORTHO05D000006	6.4e-12	75.9	103	35.0
Manes.17G001983	Manihot esculenta	HOM05D000003	ORTHO05D000006	6.4e-12	75.9	103	35.0
Manes.18G025364	Manihot esculenta	HOM05D000003	ORTHO05D000006	6.4e-12	75.9	113	34.5
Atru.chr4.104	Acer truncatum	HOM05D000003	ORTHO05D000004	8.4e-12	75.5	93	32.3
Atru.chr9.1445	Acer truncatum	HOM05D000003	ORTHO05D000006	8.4e-12	75.5	97	36.1
Hund00928	Selenicereus undatus	HOM05D025103	ORTHO05D011840	8.4e-12	75.5	101	33.7
TPR.G22601	Trifolium pratense	HOM05D000003	ORTHO05D000006	1.1e-11	75.1	101	34.7
Atru.chr5.349	Acer truncatum	HOM05D000003	ORTHO05D000006	1.9e-11	74.3	89	34.8
Atru.chr5.3511	Acer truncatum	HOM05D000003	ORTHO05D000006	1.9e-11	74.3	89	36.0
QL04p038160	Quercus lobata	HOM05D000003	ORTHO05D000007	1.9e-11	74.3	111	37.8
CSS0047834	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000004	2.4e-11	73.9	126	33.3
Manes.14G108432	Manihot esculenta	HOM05D000003	ORTHO05D000006	2.4e-11	73.9	94	36.2
Atru.chr1.956	Acer truncatum	HOM05D000003	ORTHO05D000006	3.2e-11	73.6	90	38.9
Manes.07G103102	Manihot esculenta	HOM05D000003	ORTHO05D000004	3.2e-11	73.6	217	25.8
Atru.chr13.1154	Acer truncatum	HOM05D000003	ORTHO05D000004	4.2e-11	73.2	92	37.0
FvH4_5g34261	Fragaria vesca	HOM05D000003	ORTHO05D000006	4.2e-11	73.2	150	29.3
Manes.03G165350	Manihot esculenta	HOM05D012396	ORTHO05D014272	4.2e-11	73.2	92	33.7
TPR.G27282	Trifolium pratense	HOM05D000003	ORTHO05D000006	4.2e-11	73.2	111	35.1
Manes.01G048981	Manihot esculenta	HOM05D000003	ORTHO05D000006	5.4e-11	72.8	105	33.3
Atru.chr6.1170	Acer truncatum	HOM05D000003	ORTHO05D000022	7.1e-11	72.4	114	36.0
Manes.05G206250	Manihot esculenta	HOM05D000003	ORTHO05D000006	7.1e-11	72.4	103	33.0
Atru.chr7.714	Acer truncatum	HOM05D000003	ORTHO05D000006	9.3e-11	72.0	89	38.2
CSS0016144	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000004	9.3e-11	72.0	126	32.5
QL01p018515	Quercus lobata	HOM05D000003	ORTHO05D011616	9.3e-11	72.0	105	36.2
Atru.chr7.256	Acer truncatum	HOM05D000003	ORTHO05D000006	1.6e-10	71.2	89	36.0
Hma1.2p1_1143F.1_g261190	Hydrangea macrophylla	HOM05D000003	ORTHO05D011616	1.6e-10	71.2	113	31.9
TPR.G35113	Trifolium pratense	HOM05D000003	ORTHO05D000006	1.6e-10	71.2	117	32.5
Dinv13162	Davidia involucrata	HOM05D000003	ORTHO05D000006	2.1e-10	70.9	95	35.8
Thecc.03G303500	Theobroma cacao	HOM05D008014	ORTHO05D009981	2.1e-10	70.9	127	32.3
CSS0039165	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000004	2.7e-10	70.5	138	31.2
COL.COLO4_12291	Corchorus olitorius	HOM05D000003	ORTHO05D000007	4.6e-10	69.7	117	35.9
AUR62029183	Chenopodium quinoa	HOM05D012396	ORTHO05D000006	6.0e-10	69.3	104	33.7
QL01p027762	Quercus lobata	HOM05D000003	ORTHO05D000006	6.0e-10	69.3	113	32.7
QL01p027824	Quercus lobata	HOM05D000003	ORTHO05D000006	6.0e-10	69.3	113	32.7
Atru.chr1.776	Acer truncatum	HOM05D000003	ORTHO05D000004	7.9e-10	68.9	90	38.9
Manes.16G058825	Manihot esculenta	HOM05D012396	ORTHO05D014272	7.9e-10	68.9	91	31.9
PSO782G4259	Papaver somniferum	HOM05D000003	ORTHO05D000006	7.9e-10	68.9	90	34.4
AUR62014610	Chenopodium quinoa	HOM05D000003	ORTHO05D011948	1.0e-09	68.6	109	27.5
AUR62035763	Chenopodium quinoa	HOM05D000003	ORTHO05D000006	1.0e-09	68.6	105	28.6
Medtr1g054775	Medicago truncatula	HOM05D000003	ORTHO05D000004	1.3e-09	68.2	93	34.4
EL10Ac8g19110	Beta vulgaris	HOM05D000003	ORTHO05D000004	1.8e-09	67.8	110	30.9
FvH4_2g12002	Fragaria vesca	HOM05D000003	ORTHO05D000006	1.8e-09	67.8	110	31.8
PSO210G5611	Papaver somniferum	HOM05D000003	ORTHO05D000006	1.8e-09	67.8	106	30.2
TPR.G18288	Trifolium pratense	HOM05D000003	ORTHO05D000006	1.8e-09	67.8	117	30.8
Atru.chr3.1522	Acer truncatum	HOM05D000003	ORTHO05D000006	2.3e-09	67.4	89	36.0
Atru.chr9.1348	Acer truncatum	HOM05D000003	ORTHO05D000006	3.0e-09	67.0	89	33.7
Atru.chr13.1905	Acer truncatum	HOM05D000003	ORTHO05D000004	3.9e-09	66.6	90	40.0
PSO832G4459	Papaver somniferum	HOM05D000003	ORTHO05D000006	5.1e-09	66.2	108	37.0
FvH4_2g11954	Fragaria vesca	HOM05D000003	ORTHO05D000006	6.7e-09	65.9	98	32.7
Manes.05G149001	Manihot esculenta	HOM05D000003	ORTHO05D000006	6.7e-09	65.9	108	27.8
Aqoxy7G01468	Aquilegia oxysepala	HOM05D000003	ORTHO05D000006	8.7e-09	65.5	117	32.5
AUR62042149	Chenopodium quinoa	HOM05D012396	ORTHO05D022326	8.7e-09	65.5	109	29.4
Duzib192G0668	Durio zibethinus	HOM05D000003	ORTHO05D000006	8.7e-09	65.5	111	30.6
Atru.chr7.120	Acer truncatum	HOM05D000003	ORTHO05D000004	1.1e-08	65.1	92	34.8
Manes.09G048156	Manihot esculenta	HOM05D000003	ORTHO05D014272	1.1e-08	65.1	113	31.0
COL.COLO4_19293	Corchorus olitorius	HOM05D000155	ORTHO05D000022	1.5e-08	64.7	106	34.0
Manes.02G220001	Manihot esculenta	HOM05D000003	ORTHO05D000006	1.5e-08	64.7	103	30.1
TPR.G29860	Trifolium pratense	HOM05D004401	ORTHO05D005169	1.5e-08	64.7	148	25.7
CSS0029354	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000004	1.9e-08	64.3	111	32.4
Manes.08G081422	Manihot esculenta	HOM05D000003	ORTHO05D000006	1.9e-08	64.3	113	30.1
FvH4_6g46881	Fragaria vesca	HOM05D000003	ORTHO05D000022	2.5e-08	63.9	150	27.3
Aqoxy7G02896	Aquilegia oxysepala	HOM05D000003	ORTHO05D011616	3.3e-08	63.5	111	27.9
AUR62033666	Chenopodium quinoa	HOM05D000003	ORTHO05D011948	4.3e-08	63.2	111	30.6
RcHm_v2.0_Chr1g0342601	Rosa chinensis	HOM05D000003	ORTHO05D000006	4.3e-08	63.2	137	25.5
TPR.G13276	Trifolium pratense	HOM05D000003	ORTHO05D000004	4.3e-08	63.2	135	29.6
AUR62017627	Chenopodium quinoa	HOM05D000003	ORTHO05D011948	5.6e-08	62.8	140	27.1
QL02p088210	Quercus lobata	HOM05D000003	ORTHO05D000004	5.6e-08	62.8	82	29.3
ECA003G0003	Erigeron canadensis	HOM05D000003	ORTHO05D000007	7.4e-08	62.4	99	33.3
ECA039G0028	Erigeron canadensis	HOM05D003783	ORTHO05D004568	7.4e-08	62.4	99	33.3
COL.COLO4_33181	Corchorus olitorius	HOM05D000003	ORTHO05D000006	9.6e-08	62.0	90	34.4
QL11p054864	Quercus lobata	HOM05D000003	ORTHO05D000007	9.6e-08	62.0	95	34.7
QL10p050539	Quercus lobata	HOM05D000003	ORTHO05D000006	1.6e-07	61.2	141	27.7
Sopen12g011700	Solanum pennellii	HOM05D000003	ORTHO05D000004	1.6e-07	61.2	107	32.7
CSS0020179	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000004	2.1e-07	60.8	126	30.2
COL.COLO4_13796	Corchorus olitorius	HOM05D000003	ORTHO05D000007	2.1e-07	60.8	73	38.4
FvH4_2g12222	Fragaria vesca	HOM05D000003	ORTHO05D000006	2.1e-07	60.8	98	30.6
FvH4_5g27994	Fragaria vesca	HOM05D000003	ORTHO05D000004	2.1e-07	60.8	101	32.7
QL02p025388	Quercus lobata	HOM05D000003	ORTHO05D011616	2.1e-07	60.8	135	30.4
Rhsim07G0171700	Rhododendron simsii	HOM05D000003	ORTHO05D000006	2.1e-07	60.8	70	42.9
BcaC04g19510	Brassica carinata	HOM05D000003	ORTHO05D000006	2.8e-07	60.5	111	32.4
TPR.G31613	Trifolium pratense	HOM05D000003	ORTHO05D000007	2.8e-07	60.5	112	30.4
Aqoxy4G02040	Aquilegia oxysepala	HOM05D000003	ORTHO05D000004	3.7e-07	60.1	111	32.4
EL10Ac7g16951	Beta vulgaris	HOM05D000003	ORTHO05D000006	3.7e-07	60.1	111	22.5
Cpa.g.sc39.51	Carica papaya	HOM05D011552	ORTHO05D016193	3.7e-07	60.1	70	35.7
Gohir.A10G131300	Gossypium hirsutum	HOM05D000003	ORTHO05D014272	3.7e-07	60.1	99	33.3
QL12p038026	Quercus lobata	HOM05D022054	ORTHO05D000006	3.7e-07	60.1	142	28.2
Lj2g0021734	Lotus japonicus	HOM05D000003	ORTHO05D000006	4.8e-07	59.7	92	33.7
PSO017G3046	Papaver somniferum	HOM05D053590	ORTHO05D000006	4.8e-07	59.7	110	34.5
PSO478G0451	Papaver somniferum	HOM05D000003	ORTHO05D000006	4.8e-07	59.7	99	31.3
PGR142G1125	Punica granatum	HOM05D000003	ORTHO05D000006	4.8e-07	59.7	113	29.2
Thecc.05G092600	Theobroma cacao	HOM05D000024	ORTHO05D000006	4.8e-07	59.7	97	29.9
TPR.G35752	Trifolium pratense	HOM05D000003	ORTHO05D010993	4.8e-07	59.7	110	30.9
Aqoxy3G02257	Aquilegia oxysepala	HOM05D000003	ORTHO05D000006	6.2e-07	59.3	137	32.1
AUR62020937	Chenopodium quinoa	HOM05D000003	ORTHO05D011948	6.2e-07	59.3	77	31.2
SGA_v2.0_scaffold255G45482	Striga asiatica	HOM05D000003	ORTHO05D000006	6.2e-07	59.3	95	35.8
Atru.chr11.1396	Acer truncatum	HOM05D012396	ORTHO05D014272	8.1e-07	58.9	155	29.0
Atru.chr4.172	Acer truncatum	HOM05D000003	ORTHO05D000004	8.1e-07	58.9	76	34.2
Sopen00g012830	Solanum pennellii	HOM05D000003	ORTHO05D000004	8.1e-07	58.9	62	43.5
Sopen08g014400	Solanum pennellii	HOM05D000003	ORTHO05D000004	8.1e-07	58.9	62	43.5
Manes.17G022501	Manihot esculenta	HOM05D000003	ORTHO05D000006	1.1e-06	58.5	61	36.1
RcHm_v2.0_Chr5g0053531	Rosa chinensis	HOM05D000003	ORTHO05D000004	1.1e-06	58.5	98	28.6
Aqoxy3G02350	Aquilegia oxysepala	HOM05D013112	ORTHO05D000006	1.4e-06	58.2	90	31.1
PSO063G2458	Papaver somniferum	HOM05D000003	ORTHO05D000006	1.4e-06	58.2	100	32.0
PSO541G2151	Papaver somniferum	HOM05D000003	ORTHO05D000004	1.4e-06	58.2	177	26.0
Sopen00g010420	Solanum pennellii	HOM05D000003	ORTHO05D000007	1.4e-06	58.2	62	43.5
FvH4_1g29781	Fragaria vesca	HOM05D010299	ORTHO05D019146	1.8e-06	57.8	84	36.9
Manes.12G050866	Manihot esculenta	HOM05D020389	ORTHO05D014272	1.8e-06	57.8	72	30.6
RcHm_v2.0_Chr2g0146151	Rosa chinensis	HOM05D000003	ORTHO05D000006	1.8e-06	57.8	99	27.3
Thecc.03G303800	Theobroma cacao	HOM05D008014	ORTHO05D009981	1.8e-06	57.8	93	29.0
Cpa.g.sc263.17	Carica papaya	HOM05D000003	ORTHO05D000006	2.4e-06	57.4	61	34.4
CiPaw.08G122600	Carya illinoinensis	HOM05D000003	ORTHO05D000006	2.4e-06	57.4	98	31.6
COL.COLO4_26422	Corchorus olitorius	HOM05D000003	ORTHO05D000006	2.4e-06	57.4	121	33.1
Sopen04g018170	Solanum pennellii	HOM05D000003	ORTHO05D000004	2.4e-06	57.4	62	41.9
Sopen10g008120	Solanum pennellii	HOM05D000003	ORTHO05D000004	2.4e-06	57.4	62	41.9
Aqoxy1G01582	Aquilegia oxysepala	HOM05D000003	ORTHO05D000004	3.1e-06	57.0	111	30.6
AUR62005006	Chenopodium quinoa	HOM05D000003	ORTHO05D011948	3.1e-06	57.0	77	28.6
AUR62031169	Chenopodium quinoa	HOM05D000003	ORTHO05D011948	3.1e-06	57.0	96	28.1
QL04p048382	Quercus lobata	HOM05D000003	ORTHO05D011840	3.1e-06	57.0	86	32.6
QL04p091860	Quercus lobata	HOM05D000003	ORTHO05D044761	3.1e-06	57.0	54	46.3
PSO210G1224	Papaver somniferum	HOM05D000003	ORTHO05D000006	4.0e-06	56.6	105	31.4
Rhsim08G0149800	Rhododendron simsii	HOM05D000001	ORTHO05D008374	4.0e-06	56.6	71	38.0
Sopen00g009820	Solanum pennellii	HOM05D000003	ORTHO05D000004	4.0e-06	56.6	82	34.1
AUR62020928	Chenopodium quinoa	HOM05D000001	ORTHO05D011365	5.3e-06	56.2	95	29.5
COL.COLO4_35459	Corchorus olitorius	HOM05D013479	ORTHO05D011616	5.3e-06	56.2	63	38.1
Manes.06G066201	Manihot esculenta	HOM05D039803	ORTHO05D014272	5.3e-06	56.2	87	32.2
PSO675G6789	Papaver somniferum	HOM05D000003	ORTHO05D000006	6.9e-06	55.8	103	27.2
PSO832G1564	Papaver somniferum	HOM05D000003	ORTHO05D000006	6.9e-06	55.8	109	29.4
CANSAT35G1482	Cannabis sativa	HOM05D000003	ORTHO05D000006	9.0e-06	55.5	109	29.4
AUR62035843	Chenopodium quinoa	HOM05D012396	ORTHO05D000006	9.0e-06	55.5	67	34.3
Dinv43396	Davidia involucrata	HOM05D017375	ORTHO05D006516	9.0e-06	55.5	78	38.5
FvH4_6g27602	Fragaria vesca	HOM05D000003	ORTHO05D000006	9.0e-06	55.5	115	27.0
PSO832G3311	Papaver somniferum	HOM05D000003	ORTHO05D000006	9.0e-06	55.5	111	26.1
Rhsim11G0134900	Rhododendron simsii	HOM05D003042	ORTHO05D003670	9.0e-06	55.5	65	38.5
vmacro16232	Vaccinium macrocarpon	HOM05D000003	ORTHO05D000007	9.0e-06	55.5	109	29.4

External Sequences (optional)

External Sequences Type

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MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

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