Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr0c11g0499571 Rosa chinensis HOM05D004863 ORTHO05D005802 1.6e-42 175.6 85 100.0
RcHm_v2.0_Chr0c11g0499371 Rosa chinensis HOM05D004863 ORTHO05D005802 2.9e-36 154.8 74 100.0
RcHm_v2.0_Chr7g0236141 Rosa chinensis HOM05D004863 ORTHO05D005802 1.1e-35 152.9 74 98.6
RcHm_v2.0_Chr7g0236461 Rosa chinensis HOM05D004863 ORTHO05D005802 5.4e-35 150.6 73 98.6
RcHm_v2.0_Chr7g0236501 Rosa chinensis HOM05D004863 ORTHO05D005802 5.4e-35 150.6 73 98.6
RcHm_v2.0_Chr5g0049691 Rosa chinensis HOM05D004863 ORTHO05D005802 3.7e-31 137.9 73 91.8
RcHm_v2.0_Chr7g0230601 Rosa chinensis HOM05D004863 ORTHO05D005802 3.7e-31 137.9 71 94.4
RcHm_v2.0_Chr7g0231171 Rosa chinensis HOM05D004863 ORTHO05D005802 3.1e-30 134.8 73 90.4
FAN04G1688 Fragaria x ananassa HOM05D004863 ORTHO05D005802 1.7e-28 129.0 73 86.3
FAN18G0869 Fragaria x ananassa HOM05D004863 ORTHO05D005802 6.4e-28 127.1 73 84.9
FAN13G2483 Fragaria x ananassa HOM05D004863 ORTHO05D005802 4.6e-26 120.9 73 83.6
FvH4_5g35270 Fragaria vesca HOM05D004863 ORTHO05D005802 1.3e-25 119.4 73 82.2
FAN08G0290 Fragaria x ananassa HOM05D004863 ORTHO05D005802 2.1e-18 95.5 53 88.7
Rhsim09G0179600 Rhododendron simsii HOM05D004863 ORTHO05D005802 1.5e-13 79.3 81 53.1
Cfa001286 Carpinus fangiana HOM05D004863 ORTHO05D005802 2.6e-13 78.6 79 57.0
Haze_17264 Corylus avellana HOM05D000087 ORTHO05D000793 3.4e-13 78.2 79 57.0
Manes.10G009400 Manihot esculenta HOM05D004863 ORTHO05D005802 4.5e-13 77.8 79 53.2
Hma1.2p1_3100F.1_g332690 Hydrangea macrophylla HOM05D004863 ORTHO05D005802 7.7e-13 77.0 79 55.7
Prupe.2G254800 Prunus persica HOM05D004863 ORTHO05D005802 2.2e-12 75.5 79 53.2
Nitab4.5_0012306g0020 Nicotiana tabacum HOM05D004863 ORTHO05D005802 3.8e-12 74.7 78 52.6
QL08p063631 Quercus lobata HOM05D004863 ORTHO05D005802 3.8e-12 74.7 76 56.6
Dinv21763 Davidia involucrata HOM05D004863 ORTHO05D005802 6.5e-12 73.9 76 59.2
Potri.008G072300 Populus trichocarpa HOM05D004863 ORTHO05D005802 1.4e-11 72.8 79 53.2
SalBow3G1147 Salvia bowleyana HOM05D004863 ORTHO05D005802 1.4e-11 72.8 78 50.0
Actinidia00966 Actinidia chinensis HOM05D004863 ORTHO05D005802 1.9e-11 72.4 77 53.2
CiPaw.01G301000 Carya illinoinensis HOM05D004863 ORTHO05D005802 2.5e-11 72.0 79 50.6
Ciclev10031002m.g Citrus clementina HOM05D004863 ORTHO05D005802 4.2e-11 71.2 76 52.6
CsaV3_5G010370 Cucumis sativus L. HOM05D004863 ORTHO05D005802 4.2e-11 71.2 79 50.6
MSTRG.8933 Avicennia marina HOM05D004863 ORTHO05D005802 5.5e-11 70.9 77 49.4
ClCG07G004460 Citrullus lanatus HOM05D004863 ORTHO05D005802 5.5e-11 70.9 75 56.0
Nitab4.5_0001163g0110 Nicotiana tabacum HOM05D004863 ORTHO05D005802 1.6e-10 69.3 78 48.7
Atru.chr12.77 Acer truncatum HOM05D004863 ORTHO05D005802 4.6e-10 67.8 79 50.6
CAN.G1432.18 Capsicum annuum HOM05D004863 ORTHO05D005802 4.6e-10 67.8 79 48.1
MD12G1179600 Malus domestica HOM05D004863 ORTHO05D005802 6.1e-10 67.4 79 45.6
Eucgr.G03083 Eucalyptus grandis HOM05D004863 ORTHO05D005802 7.9e-10 67.0 75 53.3
Sed0025167 Sechium edule HOM05D004863 ORTHO05D005802 1.0e-09 66.6 70 55.7
Solyc06g074870.3 Solanum lycopersicum HOM05D004863 ORTHO05D005802 1.8e-09 65.9 76 47.4
Sopen06g031290 Solanum pennellii HOM05D004863 ORTHO05D005802 1.8e-09 65.9 76 47.4
Sed0002460 Sechium edule HOM05D004863 ORTHO05D005802 3.0e-09 65.1 80 51.2
Lalb_Chr10g0105231 Lupinus albus HOM05D004863 ORTHO05D005802 8.8e-09 63.5 68 52.9
COL.COLO4_25779 Corchorus olitorius HOM05D007663 ORTHO05D009455 3.3e-08 61.6 79 48.1
Migut.F00644 Erythranthe guttata HOM05D004863 ORTHO05D005802 3.3e-08 61.6 76 44.7
MELO3C018373.2 Cucumis melo HOM05D004863 ORTHO05D005802 4.3e-08 61.2 75 50.7
Duzib128G0112 Durio zibethinus HOM05D004863 ORTHO05D005802 4.3e-08 61.2 77 48.1
SGA_v2.0_scaffold60G20969 Striga asiatica HOM05D004863 ORTHO05D005802 4.3e-08 61.2 73 46.6
ECA233G5735 Erigeron canadensis HOM05D000718 ORTHO05D005802 5.7e-08 60.8 78 44.9
CANSAT32G0002 Cannabis sativa HOM05D004863 ORTHO05D005802 2.8e-07 58.5 79 44.3
CANSAT56G0816 Cannabis sativa HOM05D004863 ORTHO05D005802 2.8e-07 58.5 79 44.3
TWI09G1305 Tripterygium wilfordii HOM05D004863 ORTHO05D005802 6.3e-07 57.4 77 48.1
Cc02_g05730 Coffea canephora HOM05D004863 ORTHO05D005802 8.2e-07 57.0 81 44.4
Actinidia00665 Actinidia chinensis HOM05D004863 ORTHO05D005802 1.4e-06 56.2 82 43.9
GSVIVG01032766001 Vitis vinifera HOM05D004863 ORTHO05D005802 1.4e-06 56.2 81 40.7
Sabra08G0053500 Salix brachista HOM05D004863 ORTHO05D005802 1.8e-06 55.8 76 51.3
AUR62012290 Chenopodium quinoa HOM05D004863 ORTHO05D005802 5.3e-06 54.3 75 48.0
LjContig00357g0010590 Lotus japonicus HOM05D004863 ORTHO05D005802 5.3e-06 54.3 70 44.3
Ca_05983_v3 Cicer arietinum L. HOM05D004863 ORTHO05D005802 9.1e-06 53.5 69 49.3
Ca_05985_v3 Cicer arietinum L. HOM05D004863 ORTHO05D005802 9.1e-06 53.5 69 49.3

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (1 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (2 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (8 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings