Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046213 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 5.1e-84 314.3 153 100.0
CSS0010565 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 2.5e-70 268.9 153 88.2
CSS0024463 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 3.7e-66 255.0 153 83.7
CSS0027113 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 8.2e-66 253.8 154 85.1
CSS0027443 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 1.4e-60 236.5 149 79.9
CSS0018501 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 3.0e-60 235.3 150 78.7
CSS0037593 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.1e-57 225.3 187 66.3
CSS0024218 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 4.1e-57 224.9 191 65.4
RhsimUnG0018200 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.1e-33 147.1 190 48.4
Rhsim04G0054300 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.3e-31 140.2 189 47.1
Rhsim04G0055200 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.7e-31 139.8 191 45.0
Rhsim04G0053600 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.3e-31 139.4 191 45.0
Rhsim04G0054600 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.0e-31 139.0 191 45.0
Rhsim04G0055600 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.2e-29 131.3 189 46.6
Rhsim04G0053900 Rhododendron simsii HOM05D000092 ORTHO05D000042 8.0e-29 131.0 190 46.8
Rhsim04G0054000 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.0e-27 126.3 167 47.9
vmacro09349 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.6e-24 116.7 180 43.9
Dinv01598 Davidia involucrata HOM05D000092 ORTHO05D000042 5.0e-23 111.7 169 38.5
Dinv03248 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-20 104.0 189 37.0
Dinv05255 Davidia involucrata HOM05D000092 ORTHO05D000042 2.3e-20 102.8 187 35.3
Dinv05441 Davidia involucrata HOM05D000092 ORTHO05D000042 6.8e-20 101.3 158 37.3
Dinv40988 Davidia involucrata HOM05D000092 ORTHO05D000042 6.8e-20 101.3 169 37.3
Dinv05244 Davidia involucrata HOM05D000092 ORTHO05D000042 2.6e-19 99.4 182 34.6
Dinv03245 Davidia involucrata HOM05D000092 ORTHO05D000042 3.4e-19 99.0 189 34.9
Dinv03240 Davidia involucrata HOM05D000092 ORTHO05D000042 7.5e-19 97.8 182 35.7
Dinv03237 Davidia involucrata HOM05D000092 ORTHO05D000042 2.2e-18 96.3 182 35.2
Dinv03242 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-17 92.8 162 35.2
Dinv18880 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-15 84.3 133 36.1
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 4.7e-13 78.6 171 32.7
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 4.7e-13 78.6 171 32.7
Dinv20729 Davidia involucrata HOM05D000092 ORTHO05D000042 5.2e-12 75.1 121 39.7
Dinv12837 Davidia involucrata HOM05D000092 ORTHO05D000042 2.9e-10 69.3 125 36.8
Dinv03246 Davidia involucrata HOM05D000092 ORTHO05D000042 4.9e-10 68.6 162 34.0
Thecc.05G202500 Theobroma cacao HOM05D000092 ORTHO05D000042 1.4e-09 67.0 149 32.2
Thecc.05G211400 Theobroma cacao HOM05D000092 ORTHO05D000042 4.1e-09 65.5 73 45.2
Dinv20558 Davidia involucrata HOM05D000092 ORTHO05D000042 1.2e-08 63.9 169 29.0
Dinv20738 Davidia involucrata HOM05D000092 ORTHO05D000042 1.2e-08 63.9 169 29.0
Manes.02G215000 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 99 38.4
Manes.02G215120 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 99 37.4
Manes.02G215445 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 99 37.4
Manes.02G215615 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 99 37.4
Manes.07G062324 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 99 38.4
COL.COLO4_32833 Corchorus olitorius HOM05D000092 ORTHO05D000042 1.6e-08 63.5 76 44.7
Dinv04828 Davidia involucrata HOM05D000092 ORTHO05D000042 1.6e-08 63.5 172 27.9
Dinv07579 Davidia involucrata HOM05D000092 ORTHO05D000042 1.6e-08 63.5 121 36.4
Manes.02G215325 Manihot esculenta HOM05D000092 ORTHO05D000042 1.6e-08 63.5 99 37.4
Manes.02G215405 Manihot esculenta HOM05D000092 ORTHO05D000042 1.6e-08 63.5 99 36.4
Manes.02G215700 Manihot esculenta HOM05D000092 ORTHO05D000042 1.6e-08 63.5 99 37.4
Potri.005G061860 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.6e-08 63.5 73 45.2
Thecc.05G202900 Theobroma cacao HOM05D000092 ORTHO05D000042 1.6e-08 63.5 144 31.9
Thecc.05G202700 Theobroma cacao HOM05D000092 ORTHO05D000042 2.1e-08 63.2 144 31.9
Dinv10941 Davidia involucrata HOM05D000092 ORTHO05D000042 2.7e-08 62.8 162 30.2
Manes.02G215400 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-08 62.8 99 37.4
Manes.02G215420 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-08 62.8 99 37.4
Manes.02G215430 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-08 62.8 99 37.4
VMungo0331G0423 Vigna mungo HOM05D000092 ORTHO05D000042 2.7e-08 62.8 157 30.6
Eucgr.L00094 Eucalyptus grandis HOM05D000092 ORTHO05D000042 3.5e-08 62.4 112 33.9
Manes.02G215425 Manihot esculenta HOM05D000092 ORTHO05D000042 3.5e-08 62.4 99 36.4
PGR042G3726 Punica granatum HOM05D000092 ORTHO05D000042 3.5e-08 62.4 72 41.7
QL01p042119 Quercus lobata HOM05D000092 ORTHO05D000042 4.6e-08 62.0 143 28.7
Dinv07584 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-08 61.6 106 34.0
Dinv12839 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-08 61.6 64 50.0
Dinv40446 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-08 61.6 83 41.0
Manes.07G060700 Manihot esculenta HOM05D000092 ORTHO05D000042 6.0e-08 61.6 80 38.8
Eucgr.L00073 Eucalyptus grandis HOM05D000092 ORTHO05D000042 1.0e-07 60.8 122 30.3
Glyma.07G065000 Glycine max HOM05D000092 ORTHO05D000042 1.0e-07 60.8 77 39.0
Manes.07G062340 Manihot esculenta HOM05D000092 ORTHO05D000042 1.0e-07 60.8 76 44.7
Manes.07G062404 Manihot esculenta HOM05D000092 ORTHO05D000042 1.0e-07 60.8 76 44.7
Potri.005G062130 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.0e-07 60.8 73 43.8
Dinv12835 Davidia involucrata HOM05D000092 ORTHO05D000042 1.3e-07 60.5 77 45.5
QL01p042065 Quercus lobata HOM05D000092 ORTHO05D000042 1.3e-07 60.5 143 28.0
Sabra13G0028000 Salix brachista HOM05D000092 ORTHO05D000042 1.3e-07 60.5 101 37.6
Thecc.05G297500 Theobroma cacao HOM05D000092 ORTHO05D000042 1.3e-07 60.5 96 33.3
VMungo0331G0195 Vigna mungo HOM05D000092 ORTHO05D000042 1.3e-07 60.5 82 35.4
QL03p003203 Quercus lobata HOM05D000092 ORTHO05D000042 1.7e-07 60.1 75 41.3
Cfa006504 Carpinus fangiana HOM05D000092 ORTHO05D000042 2.3e-07 59.7 111 29.7
CiPaw.08G175500 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.3e-07 59.7 163 25.8
Manes.07G063100 Manihot esculenta HOM05D000092 ORTHO05D000042 2.3e-07 59.7 76 44.7
PGR042G0832 Punica granatum HOM05D000092 ORTHO05D000042 2.3e-07 59.7 67 43.3
QL03p002957 Quercus lobata HOM05D000092 ORTHO05D000042 2.3e-07 59.7 94 38.3
Duzib192G0626 Durio zibethinus HOM05D000092 ORTHO05D000042 3.0e-07 59.3 98 37.8
Glyma.07G065500 Glycine max HOM05D000092 ORTHO05D000042 3.0e-07 59.3 153 28.1
Manes.07G060300 Manihot esculenta HOM05D000092 ORTHO05D000042 3.0e-07 59.3 71 43.7
Manes.07G061500 Manihot esculenta HOM05D000092 ORTHO05D000042 3.0e-07 59.3 71 43.7
Potri.005G042400 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.0e-07 59.3 94 40.4
Manes.07G062348 Manihot esculenta HOM05D000092 ORTHO05D000042 3.9e-07 58.9 76 43.4
Thecc.05G224600 Theobroma cacao HOM05D000092 ORTHO05D000042 3.9e-07 58.9 155 27.7
arahy.Tifrunner.gnm1.ann1.TXZ93S Arachis hypogaea HOM05D000092 ORTHO05D000042 5.1e-07 58.5 145 30.3
Lj1g0024619 Lotus japonicus HOM05D000092 ORTHO05D000042 5.1e-07 58.5 98 33.7
Manes.07G061980 Manihot esculenta HOM05D000092 ORTHO05D000042 5.1e-07 58.5 67 44.8
Manes.07G062308 Manihot esculenta HOM05D000092 ORTHO05D000042 5.1e-07 58.5 71 43.7
COL.COLO4_20151 Corchorus olitorius HOM05D000092 ORTHO05D000042 6.6e-07 58.2 81 38.3
Dinv36125 Davidia involucrata HOM05D000092 ORTHO05D000042 6.6e-07 58.2 100 34.0
Manes.07G060708 Manihot esculenta HOM05D000092 ORTHO05D000042 6.6e-07 58.2 76 43.4
Dinv07581 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-07 57.8 77 46.8
Dinv07585 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-07 57.8 77 46.8
Dinv18646 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-07 57.8 100 35.0
Dinv26261 Davidia involucrata HOM05D000092 ORTHO05D000042 8.6e-07 57.8 100 35.0
Duzib177G0159 Durio zibethinus HOM05D000092 ORTHO05D000042 8.6e-07 57.8 89 42.7
Glyma.U031414 Glycine max HOM05D000092 ORTHO05D000042 8.6e-07 57.8 152 30.3
Gohir.D10G253550 Gossypium hirsutum HOM05D000092 ORTHO05D000042 8.6e-07 57.8 98 33.7
Phvul.008G070800 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 8.6e-07 57.8 78 37.2
Thecc.05G295000 Theobroma cacao HOM05D000092 ORTHO05D000042 8.6e-07 57.8 102 32.4
Gohir.D11G270500 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.1e-06 57.4 105 31.4
Manes.07G062700 Manihot esculenta HOM05D000092 ORTHO05D000042 1.1e-06 57.4 111 32.4
VMungo0331G0510 Vigna mungo HOM05D000092 ORTHO05D000042 1.1e-06 57.4 77 39.0
Gorai.011G294500 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.5e-06 57.0 98 33.7
Lalb_Chr01g0006961 Lupinus albus HOM05D000092 ORTHO05D000042 1.5e-06 57.0 116 33.6
Duzib177G0490 Durio zibethinus HOM05D000092 ORTHO05D000042 1.9e-06 56.6 89 40.4
Duzib177G0893 Durio zibethinus HOM05D000092 ORTHO05D000042 1.9e-06 56.6 76 44.7
Glyma.07G065600 Glycine max HOM05D000092 ORTHO05D000042 1.9e-06 56.6 77 36.4
QL03p002457 Quercus lobata HOM05D000092 ORTHO05D000042 1.9e-06 56.6 66 42.4
VMungo0166G0001 Vigna mungo HOM05D000092 ORTHO05D000042 1.9e-06 56.6 66 39.4
VMungo0331G1299 Vigna mungo HOM05D000092 ORTHO05D000042 1.9e-06 56.6 74 40.5
GSVIVG01036191001 Vitis vinifera HOM05D000092 ORTHO05D000042 1.9e-06 56.6 140 29.3
arahy.Tifrunner.gnm1.ann1.Y9RN7U Arachis hypogaea HOM05D000092 ORTHO05D000042 2.5e-06 56.2 137 29.9
Duzib177G0387 Durio zibethinus HOM05D000092 ORTHO05D000042 2.5e-06 56.2 89 40.4
Duzib192G0564 Durio zibethinus HOM05D000092 ORTHO05D000042 2.5e-06 56.2 94 37.2
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 2.5e-06 56.2 71 45.1
FAN11G3620 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.3e-06 55.8 118 30.5
Manes.10G028600 Manihot esculenta HOM05D000092 ORTHO05D000042 3.3e-06 55.8 78 37.2
PGR042G3045 Punica granatum HOM05D000092 ORTHO05D000042 3.3e-06 55.8 72 40.3
QL03p001771 Quercus lobata HOM05D000092 ORTHO05D000042 3.3e-06 55.8 71 40.8
Thecc.05G296200 Theobroma cacao HOM05D000092 ORTHO05D000042 3.3e-06 55.8 81 37.0
Eucgr.G00878 Eucalyptus grandis HOM05D000092 ORTHO05D000042 4.3e-06 55.5 69 44.9
Glyma.07G062900 Glycine max HOM05D000092 ORTHO05D000042 4.3e-06 55.5 153 29.4
Glyma.U031914 Glycine max HOM05D000092 ORTHO05D000042 4.3e-06 55.5 77 41.6
Manes.03G060801 Manihot esculenta HOM05D000092 ORTHO05D000042 4.3e-06 55.5 179 26.8
Manes.07G060750 Manihot esculenta HOM05D000092 ORTHO05D000042 4.3e-06 55.5 99 34.3
Manes.10G028501 Manihot esculenta HOM05D000092 ORTHO05D000042 4.3e-06 55.5 78 35.9
QL03p001787 Quercus lobata HOM05D000092 ORTHO05D000042 4.3e-06 55.5 69 42.0
QL03p002023 Quercus lobata HOM05D000092 ORTHO05D000042 4.3e-06 55.5 75 41.3
QL10p064757 Quercus lobata HOM05D000092 ORTHO05D000042 4.3e-06 55.5 66 43.9
Thecc.05G296500 Theobroma cacao HOM05D000092 ORTHO05D000042 4.3e-06 55.5 100 32.0
VMungo0331G0485 Vigna mungo HOM05D000092 ORTHO05D000042 4.3e-06 55.5 66 39.4
arahy.Tifrunner.gnm1.ann1.BPD95K Arachis hypogaea HOM05D000092 ORTHO05D000042 5.6e-06 55.1 104 34.6
Ca_27735_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 5.6e-06 55.1 75 37.3
Dinv02874 Davidia involucrata HOM05D000092 ORTHO05D000042 5.6e-06 55.1 72 38.9
Duzib177G0994 Durio zibethinus HOM05D000092 ORTHO05D000042 5.6e-06 55.1 89 41.6
Glyma.07G063300 Glycine max HOM05D000092 ORTHO05D000042 5.6e-06 55.1 77 37.7
Potri.005G042900 Populus trichocarpa HOM05D000092 ORTHO05D000042 5.6e-06 55.1 76 42.1
VMungo0331G0577 Vigna mungo HOM05D000092 ORTHO05D000042 5.6e-06 55.1 80 36.2
Cfa019909 Carpinus fangiana HOM05D000092 ORTHO05D000042 7.3e-06 54.7 111 29.7
COL.COLO4_37555 Corchorus olitorius HOM05D000092 ORTHO05D000042 7.3e-06 54.7 124 29.8
Psat5g221880 Pisum sativum HOM05D000092 ORTHO05D000042 7.3e-06 54.7 80 42.5
Psat5g221920 Pisum sativum HOM05D000092 ORTHO05D000042 7.3e-06 54.7 128 33.6
QL10p064739 Quercus lobata HOM05D000092 ORTHO05D000042 7.3e-06 54.7 75 41.3
RcHm_v2.0_Chr5g0080281 Rosa chinensis HOM05D000092 ORTHO05D000042 7.3e-06 54.7 108 32.4
VMungo0331G2064 Vigna mungo HOM05D000092 ORTHO05D000042 7.3e-06 54.7 135 28.1
arahy.Tifrunner.gnm1.ann1.IBP7G5 Arachis hypogaea HOM05D000092 ORTHO05D000042 9.6e-06 54.3 89 36.0
Eucgr.G01355 Eucalyptus grandis HOM05D000092 ORTHO05D000042 9.6e-06 54.3 67 46.3
Manes.07G060866 Manihot esculenta HOM05D000092 ORTHO05D000042 9.6e-06 54.3 71 39.4
Manes.07G062356 Manihot esculenta HOM05D000092 ORTHO05D000042 9.6e-06 54.3 76 42.1
Phvul.010G104500 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 9.6e-06 54.3 114 30.7
PGR031G3667 Punica granatum HOM05D000092 ORTHO05D000042 9.6e-06 54.3 74 41.9

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (8 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (3 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (31 genes)
Durio zibethinus (7 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (4 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (1 genes)
Glycine max (7 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (29 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (5 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (4 genes)
Quercus lobata (10 genes)
Rhododendron simsii (8 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (9 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (8 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings