Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042303 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 2.4e-217 758.4 354 100.0
CSS0020144 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 1.5e-182 642.9 354 87.6
CSS0014054 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 1.3e-103 380.6 355 58.0
CSS0028420 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 5.0e-98 362.1 354 56.2
Rhsim09G0114300 Rhododendron simsii HOM05D012919 ORTHO05D013819 2.2e-29 134.0 391 30.4
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 3.7e-29 133.3 350 28.6
Rhsim01G0004100 Rhododendron simsii HOM05D012919 ORTHO05D013819 6.4e-29 132.5 276 33.7
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 2.4e-28 130.6 349 28.1
vmacro07913 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 1.6e-27 127.9 353 29.2
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 2.1e-27 127.5 350 28.0
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 6.0e-27 125.9 350 28.6
vmacro07414 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 1.3e-26 124.8 365 29.9
vmacro07415 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 1.3e-26 124.8 365 29.9
vmacro22790 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 1.7e-26 124.4 354 29.9
vmacro23393 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 1.7e-26 124.4 354 29.9
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 3.0e-26 123.6 352 27.8
Rhsim11G0078200 Rhododendron simsii HOM05D012919 ORTHO05D013819 3.0e-26 123.6 372 29.8
vmacro23394 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 3.9e-26 123.2 356 29.8
Rhsim03G0269100 Rhododendron simsii HOM05D012919 ORTHO05D013819 6.6e-26 122.5 321 31.8
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 8.9e-23 112.1 349 26.4
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 3.9e-18 96.7 178 34.8
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 2.5e-17 94.0 209 34.0
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 2.1e-16 90.9 235 30.2
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 2.6e-14 84.0 232 27.2
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 3.4e-14 83.6 215 31.2
Gohir.D06G037800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 5.4e-12 76.3 186 32.3
Gohir.D08G028000 Gossypium hirsutum HOM05D009781 ORTHO05D011819 9.3e-12 75.5 187 32.1
Gohir.A11G324800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.6e-11 74.7 185 31.4
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 3.5e-11 73.6 206 29.1
Gohir.D06G036500 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.5e-11 73.6 188 31.4
Gorai.010G040800 Gossypium raimondii HOM05D009781 ORTHO05D011819 3.5e-11 73.6 188 31.4
Gorai.010G041400 Gossypium raimondii HOM05D009781 ORTHO05D011819 4.6e-11 73.2 185 31.4
SGA_v2.0_scaffold130G34356 Striga asiatica HOM05D017380 ORTHO05D019049 6.0e-11 72.8 173 34.1
CSS0013471 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 3.0e-10 70.5 217 29.5
CSS0028906 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 3.9e-10 70.1 217 29.0
Gohir.A06G038600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.9e-10 70.1 189 30.2
Gohir.A06G044600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 5.6e-09 66.2 187 28.3
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 7.3e-09 65.9 310 23.9
Thhalv10025408m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.6e-08 64.7 152 31.6
Gohir.A06G038813 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.8e-08 63.2 189 29.6
Actinidia16043 Actinidia chinensis HOM05D000249 ORTHO05D000206 8.1e-08 62.4 238 27.3
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 8.1e-08 62.4 185 30.3
Gorai.010G041700 Gossypium raimondii HOM05D009781 ORTHO05D011819 1.4e-07 61.6 159 33.3
Rhsim10G0150200 Rhododendron simsii HOM05D000249 ORTHO05D000206 2.4e-07 60.8 213 26.8
COL.COLO4_11012 Corchorus olitorius HOM05D000249 ORTHO05D000206 6.9e-07 59.3 205 28.3
Gohir.A06G038742 Gossypium hirsutum HOM05D009781 ORTHO05D011819 6.9e-07 59.3 182 28.0
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 6.9e-07 59.3 99 36.4
Aqoxy3G04200 Aquilegia oxysepala HOM05D010066 ORTHO05D011146 9.0e-07 58.9 135 28.9
Carub.0007s3641 Capsella rubella HOM05D000249 ORTHO05D000206 1.2e-06 58.5 206 28.2
COL.COLO4_22990 Corchorus olitorius HOM05D017380 ORTHO05D019049 3.4e-06 57.0 71 40.8
AL4G24320 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 9.9e-06 55.5 196 28.6

Acer truncatum (0 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (8 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (3 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (9 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (8 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (5 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (7 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings