Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0041814 Camellia sinensis var. sinensis HOM05D000375 ORTHO05D000240 1.0e-81 306.6 148 100.0
CSS0008916 Camellia sinensis var. sinensis HOM05D000375 ORTHO05D000240 1.0e-68 263.5 148 88.5
Manes.01G070800 Manihot esculenta HOM05D000375 ORTHO05D000240 3.0e-20 102.4 128 49.2
Thecc.03G265600 Theobroma cacao HOM05D000375 ORTHO05D000240 1.5e-19 100.1 119 51.3
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 2.5e-19 99.4 68 70.6
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 2.5e-19 99.4 68 70.6
vmacro14026 Vaccinium macrocarpon HOM05D000375 ORTHO05D000240 3.3e-19 99.0 75 65.3
Gohir.D12G225800 Gossypium hirsutum HOM05D000375 ORTHO05D000240 2.8e-18 95.9 113 50.4
Gohir.A12G223200 Gossypium hirsutum HOM05D000375 ORTHO05D000240 4.7e-18 95.1 113 49.6
Potri.003G118100 Populus trichocarpa HOM05D000375 ORTHO05D000240 4.7e-18 95.1 139 46.8
Gohir.A08G175500 Gossypium hirsutum HOM05D000375 ORTHO05D000240 8.1e-18 94.4 133 47.4
Duzib084G0039 Durio zibethinus HOM05D000375 ORTHO05D000240 1.8e-17 93.2 123 49.6
GSVIVG01019913001 Vitis vinifera HOM05D000375 ORTHO05D000240 1.8e-17 93.2 118 48.3
Manes.02G029175 Manihot esculenta HOM05D000375 ORTHO05D000240 3.1e-17 92.4 124 47.6
Gorai.008G241800 Gossypium raimondii HOM05D000375 ORTHO05D000240 4.0e-17 92.0 131 43.5
Gorai.004G204600 Gossypium raimondii HOM05D000375 ORTHO05D000240 5.2e-17 91.7 133 48.1
Duzib068G1297 Durio zibethinus HOM05D000375 ORTHO05D000240 6.8e-17 91.3 124 49.2
Gohir.D08G194200 Gossypium hirsutum HOM05D000375 ORTHO05D000240 8.9e-17 90.9 95 53.7
Potri.001G114000 Populus trichocarpa HOM05D000375 ORTHO05D000240 3.4e-16 89.0 105 50.5
Sabra01G0087200 Salix brachista HOM05D000375 ORTHO05D000240 3.4e-16 89.0 114 48.2
TAR629G2759 Trochodendron aralioides HOM05D000375 ORTHO05D000240 3.4e-16 89.0 118 47.5
COL.COLO4_23825 Corchorus olitorius HOM05D000375 ORTHO05D000240 6.4e-15 84.7 111 46.8
QL12p015939 Quercus lobata HOM05D000375 ORTHO05D000240 1.1e-14 84.0 113 46.9
Aqoxy7G00563 Aquilegia oxysepala HOM05D000375 ORTHO05D000240 1.4e-14 83.6 104 50.0
Ciclev10022033m.g Citrus clementina HOM05D000375 ORTHO05D000240 3.2e-14 82.4 118 46.6
TWI15G0030 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 5.4e-14 81.6 118 43.2
Sabra03G0082200 Salix brachista HOM05D000375 ORTHO05D000240 7.1e-14 81.3 121 44.6
CANSAT21G1434 Cannabis sativa HOM05D000375 ORTHO05D000240 2.7e-13 79.3 70 60.0
Dinv39048 Davidia involucrata HOM05D000375 ORTHO05D000240 1.7e-12 76.6 72 56.9
Duzib205G0951 Durio zibethinus HOM05D000375 ORTHO05D000240 1.7e-12 76.6 81 53.1
CiPaw.11G144300 Carya illinoinensis HOM05D000375 ORTHO05D000240 2.3e-12 76.3 84 48.8
TAR636G0954 Trochodendron aralioides HOM05D000375 ORTHO05D000240 5.1e-12 75.1 118 43.2
CDE12G0876 Ceratophyllum demersum HOM05D000375 ORTHO05D000240 8.6e-12 74.3 84 56.0
Nn4g26450 Nelumbo nucifera HOM05D000375 ORTHO05D000240 1.1e-11 73.9 118 43.2
Peaxi162Scf00620g00027 Petunia axillaris HOM05D000375 ORTHO05D000240 1.1e-11 73.9 103 43.7
Haze_09014 Corylus avellana HOM05D000375 ORTHO05D000240 1.9e-11 73.2 114 44.7
PSO782G4546 Papaver somniferum HOM05D000375 ORTHO05D000240 2.8e-10 69.3 68 55.9
MSTRG.23649 Avicennia marina HOM05D000375 ORTHO05D000240 4.7e-10 68.6 42 71.4
Cfa012051 Carpinus fangiana HOM05D000375 ORTHO05D000240 8.1e-10 67.8 70 54.3
Nitab4.5_0005167g0090 Nicotiana tabacum HOM05D000375 ORTHO05D000240 8.1e-10 67.8 66 53.0
Atru.chr9.1484 Acer truncatum HOM05D000375 ORTHO05D000240 1.1e-09 67.4 58 58.6
PSO478G5241 Papaver somniferum HOM05D000375 ORTHO05D000240 1.4e-09 67.0 112 42.0
CAN.G630.25 Capsicum annuum HOM05D000375 ORTHO05D000240 1.8e-09 66.6 60 58.3
MBI12_g34484_MAGBIO Magnolia biondii HOM05D000375 ORTHO05D000240 1.8e-09 66.6 84 48.8
Sopen08g028160 Solanum pennellii HOM05D000375 ORTHO05D000240 1.8e-09 66.6 68 52.9
HPP92_022248 Vanilla planifolia HOM05D000375 ORTHO05D000240 1.8e-09 66.6 69 56.5
FvH4_7g12130 Fragaria vesca HOM05D000375 ORTHO05D000240 2.4e-09 66.2 81 49.4
FAN06G0710 Fragaria x ananassa HOM05D000375 ORTHO05D000240 2.4e-09 66.2 81 49.4
FAN06G1751 Fragaria x ananassa HOM05D000375 ORTHO05D000240 2.4e-09 66.2 81 49.4
FAN10G2530 Fragaria x ananassa HOM05D000375 ORTHO05D000240 2.4e-09 66.2 81 49.4
Thecc.01G373900 Theobroma cacao HOM05D000375 ORTHO05D000240 4.0e-09 65.5 105 40.0
Solyc08g079800.4 Solanum lycopersicum HOM05D000375 ORTHO05D000240 5.2e-09 65.1 46 65.2
RcHm_v2.0_Chr1g0350881 Rosa chinensis HOM05D000375 ORTHO05D000240 6.8e-09 64.7 84 47.6
CsaV3_3G009530 Cucumis sativus L. HOM05D000375 ORTHO05D000240 8.9e-09 64.3 85 45.9
Dinv43727 Davidia involucrata HOM05D000375 ORTHO05D000240 8.9e-09 64.3 83 49.4
ClCG05G002090 Citrullus lanatus HOM05D000375 ORTHO05D000240 1.2e-08 63.9 85 48.2
HanXRQChr02g0047741 Helianthus annuus HOM05D000375 ORTHO05D000240 1.2e-08 63.9 57 52.6
ECA233G1410 Erigeron canadensis HOM05D000375 ORTHO05D000240 1.5e-08 63.5 45 62.2
MELO3C006174.2 Cucumis melo HOM05D000375 ORTHO05D000240 3.4e-08 62.4 90 43.3
Nitab4.5_0010186g0040 Nicotiana tabacum HOM05D000375 ORTHO05D000240 3.4e-08 62.4 64 48.4
Prupe.2G148100 Prunus persica HOM05D000375 ORTHO05D000240 3.4e-08 62.4 52 59.6
Hma1.2p1_0033F.1_g020990 Hydrangea macrophylla HOM05D000375 ORTHO05D000240 5.8e-08 61.6 83 47.0
Lsat_1_v5_gn_6_10680 Lactuca sativa HOM05D000375 ORTHO05D000240 5.8e-08 61.6 63 47.6
Sed0024415 Sechium edule HOM05D000375 ORTHO05D000240 5.8e-08 61.6 76 48.7
Potri.014G071800 Populus trichocarpa HOM05D000375 ORTHO05D000240 9.9e-08 60.8 84 42.9
Duzib138G0642 Durio zibethinus HOM05D000375 ORTHO05D000240 1.7e-07 60.1 83 41.0
FAN01G1328 Fragaria x ananassa HOM05D000375 ORTHO05D000240 2.9e-07 59.3 91 42.9
MD02G1201000 Malus domestica HOM05D000375 ORTHO05D000240 2.9e-07 59.3 54 50.0
Os04g0574500 Oryza sativa ssp. japonica HOM05D000375 ORTHO05D000240 2.9e-07 59.3 40 70.0
FAN03G0859 Fragaria x ananassa HOM05D000375 ORTHO05D000240 4.9e-07 58.5 67 50.7
FAN10G3750 Fragaria x ananassa HOM05D000375 ORTHO05D000240 4.9e-07 58.5 58 53.4
Sed0013097 Sechium edule HOM05D000375 ORTHO05D000240 4.9e-07 58.5 99 38.4
A04p33870 Brassica napus HOM05D000375 ORTHO05D000240 6.4e-07 58.2 49 55.1
BraA04t18847Z Brassica rapa HOM05D000375 ORTHO05D000240 6.4e-07 58.2 49 55.1
Zm00001eb250620 Zea mays HOM05D000375 ORTHO05D000240 6.4e-07 58.2 42 64.3
Gorai.007G092400 Gossypium raimondii HOM05D000375 ORTHO05D000240 8.4e-07 57.8 82 40.2
SalBow8G5453 Salvia bowleyana HOM05D000375 ORTHO05D000240 1.1e-06 57.4 69 47.8
Actinidia31428 Actinidia chinensis HOM05D000375 ORTHO05D000240 1.4e-06 57.0 89 41.6
DCAR_006786 Daucus carota HOM05D000375 ORTHO05D000240 1.4e-06 57.0 70 44.3
CiPaw.01G260300 Carya illinoinensis HOM05D000375 ORTHO05D000240 2.4e-06 56.2 69 44.9
Os02g0678800 Oryza sativa ssp. japonica HOM05D000375 ORTHO05D000240 2.4e-06 56.2 41 63.4
BcaC02g07088 Brassica carinata HOM05D000375 ORTHO05D000240 3.2e-06 55.8 49 53.1
C04p71600 Brassica napus HOM05D000375 ORTHO05D000240 3.2e-06 55.8 49 53.1
Haze_16837 Corylus avellana HOM05D000375 ORTHO05D000240 3.2e-06 55.8 74 43.2
Gohir.A11G081800 Gossypium hirsutum HOM05D000375 ORTHO05D000240 3.2e-06 55.8 80 38.8
ATR0757G059 Amborella trichopoda HOM05D000375 ORTHO05D000240 4.2e-06 55.5 36 72.2
Gohir.D11G086500 Gossypium hirsutum HOM05D000375 ORTHO05D000240 4.2e-06 55.5 82 39.0
MSTRG.11890 Avicennia marina HOM05D000375 ORTHO05D000240 5.4e-06 55.1 73 43.8
Cfa001697 Carpinus fangiana HOM05D000375 ORTHO05D000240 5.4e-06 55.1 74 43.2
Os07g0467500 Oryza sativa ssp. japonica HOM05D000375 ORTHO05D000240 5.4e-06 55.1 41 58.5
Sabra14G0051000 Salix brachista HOM05D000375 ORTHO05D000240 5.4e-06 55.1 83 43.4
Zm00001eb104790 Zea mays HOM05D000375 ORTHO05D000240 7.1e-06 54.7 41 56.1
Zm00001eb320200 Zea mays HOM05D000375 ORTHO05D000240 7.1e-06 54.7 41 56.1
BcaB06g29421 Brassica carinata HOM05D000375 ORTHO05D000240 9.2e-06 54.3 62 46.8
Thhalv10001460m.g Eutrema salsugineum HOM05D000375 ORTHO05D000240 9.2e-06 54.3 48 58.3
TWI59G1007 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 9.2e-06 54.3 51 49.0

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (2 genes)
Beta vulgaris (0 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (0 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (4 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (0 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (3 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (3 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (2 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (2 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (3 genes)

Program Settings