Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0013790 Camellia sinensis var. sinensis HOM05D054015 ORTHO05D112418 1.3e-47 192.6 91 100.0
CSS0040805 Camellia sinensis var. sinensis HOM05D054015 ORTHO05D112077 1.3e-47 192.6 91 100.0
Rhsim11G0100700 Rhododendron simsii HOM05D000103 ORTHO05D000049 7.2e-09 63.9 37 78.4
Rhsim11G0100800 Rhododendron simsii HOM05D000103 ORTHO05D000049 3.6e-08 61.6 37 75.7
Rhsim11G0100900 Rhododendron simsii HOM05D000103 ORTHO05D000049 7.9e-08 60.5 37 73.0
vmacro01611 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 1.0e-07 60.1 37 75.7
Rhsim11G0101100 Rhododendron simsii HOM05D000103 ORTHO05D000049 1.4e-07 59.7 37 75.7
Dinv24502 Davidia involucrata HOM05D000103 ORTHO05D000049 1.8e-07 59.3 37 78.4
Rhsim11G0074600 Rhododendron simsii HOM05D000103 ORTHO05D000049 2.3e-07 58.9 37 73.0
Lj5C320G10 Lonicera japonica HOM05D000103 ORTHO05D000049 3.9e-07 58.2 37 73.0
Cfa006755 Carpinus fangiana HOM05D000103 ORTHO05D000049 5.1e-07 57.8 37 73.0
Hma1.2p1_1243F.1_g269950 Hydrangea macrophylla HOM05D000103 ORTHO05D000049 6.7e-07 57.4 37 75.7
Rhsim11G0074700 Rhododendron simsii HOM05D000103 ORTHO05D000049 8.8e-07 57.0 37 70.3
Actinidia35490 Actinidia chinensis HOM05D000103 ORTHO05D000049 1.1e-06 56.6 37 75.7
Dinv24501 Davidia involucrata HOM05D000103 ORTHO05D000049 1.1e-06 56.6 37 78.4
vmacro06170 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 1.1e-06 56.6 37 70.3
Cfa006754 Carpinus fangiana HOM05D000103 ORTHO05D000049 1.5e-06 56.2 37 73.0
Rhsim11G0101000 Rhododendron simsii HOM05D000103 ORTHO05D000049 2.6e-06 55.5 37 70.3
vmacro01617 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 3.3e-06 55.1 37 73.0
vmacro23462 Vaccinium macrocarpon HOM05D000103 ORTHO05D000049 3.3e-06 55.1 37 73.0
Rhsim11G0162500 Rhododendron simsii HOM05D000103 ORTHO05D000049 4.4e-06 54.7 34 73.5
Cfa006756 Carpinus fangiana HOM05D000103 ORTHO05D000049 9.7e-06 53.5 33 75.8
Rhsim11G0102600 Rhododendron simsii HOM05D000103 ORTHO05D000049 9.7e-06 53.5 32 78.1

Acer truncatum (0 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (3 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (0 genes)
Lonicera japonica (1 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (9 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (4 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings