Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032551 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 1.3e-60 236.1 116 100.0
CSS0011431 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 1.0e-52 209.9 108 93.5
CSS0043730 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 1.0e-52 209.9 108 93.5
CSS0043606 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 2.3e-52 208.8 107 94.4
CSS0033374 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 6.3e-50 200.7 108 89.8
CSS0046295 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 4.1e-49 198.0 102 95.1
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 1.8e-12 76.3 83 49.4
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 3.4e-11 72.0 63 61.9
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 4.8e-10 68.2 77 46.8
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 1.8e-09 66.2 68 51.5
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 1.2e-08 63.5 63 54.0
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.3e-07 60.1 71 47.9
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 2.3e-07 59.3 71 43.7
Gohir.A01G126300 Gossypium hirsutum HOM05D001049 ORTHO05D001986 2.5e-06 55.8 30 83.3
Gohir.D01G113900 Gossypium hirsutum HOM05D001049 ORTHO05D001986 2.5e-06 55.8 30 83.3
Gorai.002G138900 Gossypium raimondii HOM05D001049 ORTHO05D001986 2.5e-06 55.8 30 83.3
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 3.3e-06 55.5 64 42.2
BcaC09g50859 Brassica carinata HOM05D001049 ORTHO05D001986 4.2e-06 55.1 32 81.2
CSS0024879 Camellia sinensis var. sinensis HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
Dinv42608 Davidia involucrata HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
Duzib041G0510 Durio zibethinus HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
Duzib093G0120 Durio zibethinus HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
Glyma.06G097200 Glycine max HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
Gohir.A05G219300 Gossypium hirsutum HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
Gohir.D05G221900 Gossypium hirsutum HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
Gorai.009G229300 Gossypium raimondii HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
Hma1.2p1_0125F.1_g058820 Hydrangea macrophylla HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
MD08G1199100 Malus domestica HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
MD15G1386100 Malus domestica HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
PGR042G3763 Punica granatum HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
Thecc.08G071500 Theobroma cacao HOM05D001049 ORTHO05D001986 4.2e-06 55.1 25 92.0
Manes.18G058200 Manihot esculenta HOM05D001049 ORTHO05D001986 5.5e-06 54.7 25 92.0
Prupe.1G532800 Prunus persica HOM05D001049 ORTHO05D001986 5.5e-06 54.7 25 92.0
THA.LOC104806881 Tarenaya hassleriana HOM05D001049 ORTHO05D001986 5.5e-06 54.7 27 85.2
CANSAT25G1018 Cannabis sativa HOM05D001049 ORTHO05D001986 7.2e-06 54.3 27 81.5
Cc10_g15930 Coffea canephora HOM05D001049 ORTHO05D001986 9.5e-06 53.9 26 84.6
Glyma.04G095500 Glycine max HOM05D001049 ORTHO05D001986 9.5e-06 53.9 24 95.8
Lalb_Chr04g0252811 Lupinus albus HOM05D001049 ORTHO05D001986 9.5e-06 53.9 25 88.0
Lalb_Chr11g0064941 Lupinus albus HOM05D001049 ORTHO05D001986 9.5e-06 53.9 24 95.8
Phvul.008G182200 Phaseolus vulgaris HOM05D001049 ORTHO05D001986 9.5e-06 53.9 25 88.0
Phvul.009G036200 Phaseolus vulgaris HOM05D001049 ORTHO05D001986 9.5e-06 53.9 25 88.0
Sc15g0002720 Simmondsia chinensis HOM05D001049 ORTHO05D001986 9.5e-06 53.9 25 88.0
THA.LOC104799789 Tarenaya hassleriana HOM05D001049 ORTHO05D001986 9.5e-06 53.9 25 88.0

Acer truncatum (0 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (1 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (8 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (1 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (2 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings