Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028826 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 5.3e-204 714.1 365 100.0
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 8.6e-154 547.4 445 67.6
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 7.8e-147 524.2 447 65.3
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.0e-146 523.9 379 73.4
CSS0009574 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.1e-140 501.9 369 74.5
CSS0042776 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 9.2e-140 500.7 445 64.3
CSS0004424 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 2.7e-115 419.5 412 60.0
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.6e-12 75.5 222 26.6
Thecc.05G279300 Theobroma cacao HOM05D012808 ORTHO05D000006 2.1e-11 74.3 93 38.7
Sc15g0001330 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.6e-11 73.6 116 34.5
Lj4g0011576 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-10 71.6 171 29.8
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.4e-10 70.9 117 35.0
vmacro23283 Vaccinium macrocarpon HOM05D000163 ORTHO05D009356 2.4e-10 70.9 99 36.4
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 5.2e-10 69.7 119 31.9
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.2e-09 68.6 119 32.8
Sc17g0002300 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.2e-09 68.6 116 33.6
Sc17g0002350 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.6e-09 67.4 116 33.6
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 2.6e-09 67.4 203 27.6
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.4e-09 67.0 119 33.6
Rhsim11G0150800 Rhododendron simsii HOM05D012808 ORTHO05D009356 4.4e-09 66.6 117 29.9
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.9e-09 65.5 158 29.7
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-08 65.1 252 26.2
Sc03g0004550 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.3e-08 65.1 89 32.6
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 1.3e-08 65.1 120 30.8
Sc15g0003580 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.2e-08 64.3 91 39.6
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.8e-08 63.5 127 29.9
Lsat_1_v5_gn_6_27160 Lactuca sativa HOM05D003915 ORTHO05D005386 6.4e-08 62.8 184 29.9
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 6.4e-08 62.8 127 29.9
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.4e-08 62.8 218 25.2
Lj2g0018575 Lotus japonicus HOM05D002777 ORTHO05D001516 8.4e-08 62.4 117 28.2
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.4e-08 62.4 96 34.4
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.4e-08 62.4 252 25.8
Lj5g0001897 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-07 61.6 182 26.9
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.9e-07 61.2 116 31.0
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 3.2e-07 60.5 121 33.1
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.1e-07 59.3 77 39.0
Sc14g0002520 Simmondsia chinensis HOM05D009209 ORTHO05D011705 7.1e-07 59.3 100 34.0
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 7.1e-07 59.3 116 31.0
Gorai.002G084400 Gossypium raimondii HOM05D000003 ORTHO05D015081 1.2e-06 58.5 134 24.6
Lj2g0018386 Lotus japonicus HOM05D002777 ORTHO05D001516 1.6e-06 58.2 117 27.4
Lsat_1_v5_gn_3_28940 Lactuca sativa HOM05D003915 ORTHO05D005386 2.1e-06 57.8 303 24.4
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 4.6e-06 56.6 156 26.3
arahy.Tifrunner.gnm1.ann1.2029P5 Arachis hypogaea HOM05D012808 ORTHO05D011705 6.0e-06 56.2 126 31.7
Psat0s3204g0040 Pisum sativum HOM05D007807 ORTHO05D000006 7.8e-06 55.8 102 27.5
Sc01g0007590 Simmondsia chinensis HOM05D009209 ORTHO05D011705 7.8e-06 55.8 67 35.8

Acer truncatum (0 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (1 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (7 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (2 genes)
Lonicera japonica (0 genes)
Lotus japonicus (5 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (12 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (9 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (4 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings