Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026316 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.9e-268 927.9 455 100.0
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.1e-145 517.7 427 66.3
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.2e-136 490.7 434 63.1
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.5e-118 427.9 436 55.7
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 6.6e-103 378.6 396 53.3
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 4.1e-28 130.2 159 46.5
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.7e-16 90.9 161 31.7
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.6e-16 90.5 227 27.8
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 4.4e-14 83.6 218 27.5
Rhsim05G0024200 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-13 81.6 229 26.2
CSS0006937 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.8e-13 80.1 84 39.3
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 8.3e-13 79.3 202 27.7
CSS0021891 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.9e-10 70.9 84 35.7
CSS0049061 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.8e-10 70.5 84 35.7
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.1e-09 68.9 242 25.2
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.7e-08 63.5 174 24.1
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.8e-07 61.6 129 26.4
CSS0044383 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.3e-07 61.2 159 27.7
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 5.2e-07 60.1 174 28.7
Rhsim01G0047800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.0e-06 58.2 203 26.1
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 2.0e-06 58.2 172 25.6
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 2.6e-06 57.8 141 24.8
Actinidia12328 Actinidia chinensis HOM05D008219 ORTHO05D009356 3.4e-06 57.4 142 28.9
vmacro10949 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.4e-06 57.4 198 23.7

Acer truncatum (0 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (15 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (3 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (4 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings