Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024470 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 8.4e-45 183.3 94 100.0
CSS0034897 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 3.8e-13 78.2 52 78.8
CSS0007838 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 6.5e-13 77.4 55 78.2
CSS0037793 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 8.5e-13 77.0 64 70.3
CSS0018520 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 4.2e-12 74.7 55 74.5
CSS0024000 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 9.4e-12 73.6 53 79.2
CSS0002516 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D014145 2.7e-11 72.0 53 77.4
CSS0000457 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 1.0e-10 70.1 53 77.4
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 1.8e-10 69.3 56 73.2
CSS0029324 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.5e-09 66.2 64 62.5
CSS0012027 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D014145 4.3e-09 64.7 58 69.0
RcHm_v2.0_Chr2g0099941 Rosa chinensis HOM05D002906 ORTHO05D003211 1.8e-07 59.3 43 72.1
Psat0s765g0200 Pisum sativum HOM05D002906 ORTHO05D003211 2.4e-07 58.9 43 74.4
CSS0010447 Camellia sinensis var. sinensis HOM05D000740 ORTHO05D014145 4.1e-07 58.2 45 75.6
CSS0004530 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D014145 5.3e-07 57.8 54 57.4
MD15G1249300 Malus domestica HOM05D002906 ORTHO05D003211 5.3e-07 57.8 43 69.8
Aa31LG8G15270 Aethionema arabicum HOM05D002906 ORTHO05D003211 6.9e-07 57.4 43 74.4
BcaC04g22930 Brassica carinata HOM05D002906 ORTHO05D003211 6.9e-07 57.4 43 72.1
BraA09t36816Z Brassica rapa HOM05D002906 ORTHO05D003211 6.9e-07 57.4 43 72.1
BcaB02g10717 Brassica carinata HOM05D002906 ORTHO05D003211 1.5e-06 56.2 43 72.1
BcaNung00749 Brassica carinata HOM05D002906 ORTHO05D003211 1.5e-06 56.2 43 72.1
Eucgr.J02394 Eucalyptus grandis HOM05D002906 ORTHO05D003211 1.5e-06 56.2 43 69.8
Manes.01G142700 Manihot esculenta HOM05D002906 ORTHO05D003211 1.5e-06 56.2 43 69.8
Manes.02G101100 Manihot esculenta HOM05D002906 ORTHO05D003211 1.5e-06 56.2 43 69.8
Potri.007G016100 Populus trichocarpa HOM05D002906 ORTHO05D003211 1.5e-06 56.2 43 67.4
AL3G51270 Arabidopsis lyrata HOM05D002906 ORTHO05D003211 2.0e-06 55.8 43 69.8
AL7G14840 Arabidopsis lyrata HOM05D002906 ORTHO05D003211 2.0e-06 55.8 43 69.8
Sp3g31530 Schrenkiella parvula HOM05D002906 ORTHO05D003211 2.0e-06 55.8 43 69.8
AT4G36210 Arabidopsis thaliana HOM05D002906 ORTHO05D003211 3.4e-06 55.1 43 67.4
CSS0001139 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D112888 3.4e-06 55.1 36 77.8
Glyma.11G074300 Glycine max HOM05D002906 ORTHO05D003211 3.4e-06 55.1 43 69.8
arahy.Tifrunner.gnm1.ann1.A2FF76 Arachis hypogaea HOM05D002906 ORTHO05D003211 4.5e-06 54.7 43 67.4
arahy.Tifrunner.gnm1.ann1.K7AB56 Arachis hypogaea HOM05D002906 ORTHO05D003211 4.5e-06 54.7 43 67.4
Carub.0003s3223 Capsella rubella HOM05D002906 ORTHO05D003211 4.5e-06 54.7 43 67.4
Ciclev10025097m.g Citrus clementina HOM05D002906 ORTHO05D003211 4.5e-06 54.7 43 67.4
COL.COLO4_21964 Corchorus olitorius HOM05D002906 ORTHO05D003211 4.5e-06 54.7 43 67.4
Dinv40056 Davidia involucrata HOM05D002906 ORTHO05D003211 4.5e-06 54.7 43 67.4
Migut.L00037 Erythranthe guttata HOM05D002906 ORTHO05D003211 4.5e-06 54.7 43 65.1
Medtr3g113090 Medicago truncatula HOM05D002906 ORTHO05D003211 4.5e-06 54.7 43 67.4
PGR102G3213 Punica granatum HOM05D002906 ORTHO05D003211 4.5e-06 54.7 43 67.4
TPR.G31196 Trifolium pratense HOM05D002906 ORTHO05D003211 4.5e-06 54.7 43 67.4
ClCG07G008870 Citrullus lanatus HOM05D002906 ORTHO05D003211 7.7e-06 53.9 43 65.1
MELO3C017538.2 Cucumis melo HOM05D002906 ORTHO05D003211 7.7e-06 53.9 43 65.1
CsaV3_4G005320 Cucumis sativus L. HOM05D002906 ORTHO05D003211 7.7e-06 53.9 43 65.1
Sed0023539 Sechium edule HOM05D002906 ORTHO05D003211 7.7e-06 53.9 43 65.1
GSVIVG01018828001 Vitis vinifera HOM05D002906 ORTHO05D003211 7.7e-06 53.9 43 65.1

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (3 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (14 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (1 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings