Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020580 Camellia sinensis var. sinensis HOM05D000539 ORTHO05D000233 1.8e-46 188.7 83 100.0
CSS0026465 Camellia sinensis var. sinensis HOM05D000539 ORTHO05D000233 2.1e-23 112.1 64 78.1
CSS0023486 Camellia sinensis var. sinensis HOM05D000616 ORTHO05D000233 3.0e-22 108.2 64 75.0
Rhsim01G0018800 Rhododendron simsii HOM05D000539 ORTHO05D000233 9.8e-13 76.6 71 50.7
Rhsim03G0043700 Rhododendron simsii HOM05D000539 ORTHO05D000592 2.8e-12 75.1 70 51.4
RhsimUnG0040200 Rhododendron simsii HOM05D000539 ORTHO05D000592 2.8e-12 75.1 70 51.4
Rhsim08G0058500 Rhododendron simsii HOM05D000539 ORTHO05D000592 4.8e-12 74.3 58 56.9
Rhsim08G0058700 Rhododendron simsii HOM05D000539 ORTHO05D000592 4.8e-12 74.3 58 56.9
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.3e-12 73.9 56 58.9
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-10 69.7 60 51.7
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-10 69.7 44 63.6
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-10 69.7 60 51.7
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 1.2e-10 69.7 60 50.0
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.0e-10 68.9 68 45.6
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.7e-10 68.6 59 47.5
Rhsim02G0154800 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.0e-09 64.3 62 46.8
Rhsim05G0213000 Rhododendron simsii HOM05D000539 ORTHO05D000233 6.5e-09 63.9 41 63.4
Rhsim05G0145300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-07 59.7 51 52.9
Rhsim05G0020800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.6e-07 59.3 37 64.9
RcHm_v2.0_Chr6g0261571 Rosa chinensis HOM05D000539 ORTHO05D000592 2.7e-07 58.5 64 35.9
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 3.6e-07 58.2 73 32.9
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-06 56.2 73 31.5
SHI32661 Sapria himalayana HOM05D000616 ORTHO05D000233 1.8e-06 55.8 48 50.0
SHI15762 Sapria himalayana HOM05D003883 ORTHO05D004605 2.3e-06 55.5 48 52.1
SHI19528 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-06 55.5 46 52.2
SHI39548 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-06 55.5 46 52.2
SHI43638 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-06 55.5 46 52.2
SHI43952 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-06 55.5 46 52.2
SHI19985 Sapria himalayana HOM05D000616 ORTHO05D000233 4.0e-06 54.7 46 50.0
SHI36792 Sapria himalayana HOM05D000616 ORTHO05D000062 4.0e-06 54.7 46 52.2
Atru.chr7.1246 Acer truncatum HOM05D000539 ORTHO05D000592 6.8e-06 53.9 56 44.6
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 6.8e-06 53.9 51 39.2
SHI22978 Sapria himalayana HOM05D000616 ORTHO05D000233 6.8e-06 53.9 46 50.0
Atru.chr1.738 Acer truncatum HOM05D000539 ORTHO05D000592 8.8e-06 53.5 46 47.8
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 8.8e-06 53.5 51 39.2
SHI20637 Sapria himalayana HOM05D000616 ORTHO05D000233 8.8e-06 53.5 46 50.0

Acer truncatum (2 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (2 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (15 genes)
Rosa chinensis (2 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (10 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings