Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017432 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 1.3e-96 356.7 218 100.0
CSS0044296 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D014695 7.4e-60 234.6 241 70.1
CSS0009862 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 3.5e-54 215.7 242 66.9
CSS0042319 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 3.2e-47 192.6 218 65.1
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.6e-09 67.4 106 35.8
RcHm_v2.0_Chr1g0341871 Rosa chinensis HOM05D005012 ORTHO05D005886 1.3e-08 64.3 42 66.7
RcHm_v2.0_Chr7g0230481 Rosa chinensis HOM05D005012 ORTHO05D005886 1.3e-08 64.3 42 66.7
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-08 63.9 55 52.7
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 3.8e-08 62.8 42 64.3
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.5e-07 60.1 49 59.2
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.2e-07 59.3 55 50.9
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-06 57.8 55 49.1
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-06 57.0 55 49.1
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-06 57.0 55 49.1
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.7e-06 56.6 55 49.1
FvH4_4g09791 Fragaria vesca HOM05D000107 ORTHO05D000062 2.7e-06 56.6 47 53.2
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.6e-06 56.2 50 46.0
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.6e-06 56.2 42 57.1
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.6e-06 56.2 42 57.1
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.6e-06 56.2 42 57.1
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 4.7e-06 55.8 41 56.1
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.7e-06 55.8 49 46.9
FAN12G0378 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.7e-06 55.8 47 53.2
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.7e-06 55.8 49 46.9
FAN28G1702 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.7e-06 55.8 41 58.5
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.1e-06 55.5 54 48.1
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.1e-06 55.5 55 47.3
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.0e-06 55.1 49 53.1
Rhsim05G0024300 Rhododendron simsii HOM05D005012 ORTHO05D005886 8.0e-06 55.1 46 41.3
Rhsim05G0034600 Rhododendron simsii HOM05D005012 ORTHO05D005886 8.0e-06 55.1 46 41.3

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (12 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (10 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (3 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings