Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001776 Camellia sinensis var. sinensis HOM05D061602 ORTHO05D043299 1.9e-68 262.3 128 100.0
CSS0008108 Camellia sinensis var. sinensis HOM05D061602 ORTHO05D043299 1.9e-68 262.3 128 100.0
Actinidia07956 Actinidia chinensis HOM05D006729 ORTHO05D008502 1.5e-15 86.7 62 74.2
Actinidia06196 Actinidia chinensis HOM05D006729 ORTHO05D008502 1.2e-14 83.6 70 65.7
vmacro08860 Vaccinium macrocarpon HOM05D006729 ORTHO05D008502 4.0e-13 78.6 55 70.9
Dinv25092 Davidia involucrata HOM05D006729 ORTHO05D008502 2.0e-09 66.2 59 59.3
TAR623G1267 Trochodendron aralioides HOM05D006729 ORTHO05D008502 5.9e-09 64.7 60 56.7
MD12G1049100 Malus domestica HOM05D006729 ORTHO05D008502 7.7e-09 64.3 89 41.6
Lalb_Chr20g0111151 Lupinus albus HOM05D006729 ORTHO05D008502 1.0e-08 63.9 59 55.9
CiPaw.10G022200 Carya illinoinensis HOM05D006729 ORTHO05D008502 1.7e-08 63.2 62 59.7
Hma1.2p1_0304F.1_g119210 Hydrangea macrophylla HOM05D006729 ORTHO05D008502 3.8e-08 62.0 61 57.4
Hma1.2p1_0127F.1_g059610 Hydrangea macrophylla HOM05D006729 ORTHO05D008502 6.5e-08 61.2 59 59.3
CiPaw.09G025400 Carya illinoinensis HOM05D006729 ORTHO05D008502 1.1e-07 60.5 62 56.5
MD14G1048000 Malus domestica HOM05D006729 ORTHO05D008502 1.5e-07 60.1 61 57.4
ECA248G1919 Erigeron canadensis HOM05D006729 ORTHO05D008502 1.9e-07 59.7 57 54.4
Prupe.7G087100 Prunus persica HOM05D006729 ORTHO05D008502 2.5e-07 59.3 61 54.1
QL07p025843 Quercus lobata HOM05D006729 ORTHO05D008502 2.5e-07 59.3 56 60.7
HanXRQChr01g0026291 Helianthus annuus HOM05D006729 ORTHO05D008502 7.2e-07 57.8 62 51.6
Eucgr.K01887 Eucalyptus grandis HOM05D006729 ORTHO05D008502 9.4e-07 57.4 64 53.1
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 1.2e-06 57.0 67 50.7
arahy.Tifrunner.gnm1.ann1.B8V3X4 Arachis hypogaea HOM05D006729 ORTHO05D008502 1.6e-06 56.6 60 58.3
Haze_20087 Corylus avellana HOM05D006729 ORTHO05D008502 1.6e-06 56.6 62 54.8
Oeu044686.1 Olea europaea HOM05D006729 ORTHO05D008502 2.1e-06 56.2 65 53.8
Thecc.05G181500 Theobroma cacao HOM05D006729 ORTHO05D008502 3.6e-06 55.5 62 54.8
arahy.Tifrunner.gnm1.ann1.Z8UC8R Arachis hypogaea HOM05D006729 ORTHO05D008502 4.7e-06 55.1 60 56.7
Lsat_1_v5_gn_1_56360 Lactuca sativa HOM05D006729 ORTHO05D008502 4.7e-06 55.1 47 59.6
FAN02G0869 Fragaria x ananassa HOM05D006729 ORTHO05D008502 6.1e-06 54.7 39 66.7
FAN05G4583 Fragaria x ananassa HOM05D006729 ORTHO05D008502 6.1e-06 54.7 39 66.7
FAN05G4950 Fragaria x ananassa HOM05D006729 ORTHO05D008502 6.1e-06 54.7 39 66.7
MBI05_g37660_MAGBIO Magnolia biondii HOM05D006729 ORTHO05D008502 6.1e-06 54.7 71 47.9
RcHm_v2.0_Chr3g0477721 Rosa chinensis HOM05D006729 ORTHO05D008502 6.1e-06 54.7 58 53.4
Duzib093G0804 Durio zibethinus HOM05D006729 ORTHO05D008502 8.0e-06 54.3 62 53.2
Sabra06G0152300 Salix brachista HOM05D006729 ORTHO05D008502 8.0e-06 54.3 61 47.5

Acer truncatum (0 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (1 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (3 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (0 genes)
Quercus lobata (1 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings