Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
CSS0004030	Camellia sinensis var. sinensis	HOM05D000003	ORTHO05D000006	7.7e-38	159.8	73	100.0
CiPaw.11G119300	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.8e-10	68.9	81	39.5
CiPaw.04G081300	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.2e-09	66.2	58	46.6
CiPaw.06G025000	Carya illinoinensis	HOM05D000003	ORTHO05D000006	2.0e-09	65.5	56	44.6
CiPaw.06G163500	Carya illinoinensis	HOM05D000003	ORTHO05D000006	2.6e-09	65.1	72	40.3
QL02p087915	Quercus lobata	HOM05D005966	ORTHO05D007584	1.3e-08	62.8	65	40.0
CiPaw.03G074300	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.7e-08	62.4	65	40.0
QL03p009188	Quercus lobata	HOM05D000003	ORTHO05D000006	2.9e-08	61.6	64	39.1
CiPaw.06G163400	Carya illinoinensis	HOM05D000003	ORTHO05D000006	3.7e-08	61.2	58	37.9
CiPaw.06G165800	Carya illinoinensis	HOM05D000003	ORTHO05D000006	3.7e-08	61.2	58	41.4
CiPaw.12G029100	Carya illinoinensis	HOM05D000003	ORTHO05D000006	3.7e-08	61.2	58	43.1
CiPaw.01G000700	Carya illinoinensis	HOM05D000003	ORTHO05D000006	4.9e-08	60.8	58	39.7
CiPaw.03G068000	Carya illinoinensis	HOM05D000003	ORTHO05D000006	4.9e-08	60.8	60	41.7
QL06p035637	Quercus lobata	HOM05D000141	ORTHO05D004993	4.9e-08	60.8	62	43.5
SHI34096	Sapria himalayana	HOM05D000003	ORTHO05D000004	4.9e-08	60.8	60	41.7
CiPaw.01G031000	Carya illinoinensis	HOM05D000003	ORTHO05D000006	6.4e-08	60.5	58	39.7
CiPaw.01G131400	Carya illinoinensis	HOM05D000003	ORTHO05D000006	6.4e-08	60.5	58	39.7
CiPaw.01G132400	Carya illinoinensis	HOM05D000003	ORTHO05D000006	6.4e-08	60.5	60	40.0
CiPaw.02G060000	Carya illinoinensis	HOM05D000003	ORTHO05D000006	6.4e-08	60.5	60	36.7
CiPaw.03G233400	Carya illinoinensis	HOM05D000003	ORTHO05D000006	8.3e-08	60.1	60	43.3
CiPaw.06G055400	Carya illinoinensis	HOM05D000003	ORTHO05D000006	8.3e-08	60.1	63	36.5
CiPaw.08G116600	Carya illinoinensis	HOM05D000003	ORTHO05D000006	8.3e-08	60.1	59	37.3
SHI45326	Sapria himalayana	HOM05D000003	ORTHO05D000004	8.3e-08	60.1	60	40.0
SHI47243	Sapria himalayana	HOM05D000003	ORTHO05D000004	8.3e-08	60.1	60	40.0
CiPaw.07G074900	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.1e-07	59.7	54	44.4
CiPaw.12G024400	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.1e-07	59.7	60	35.0
QL05p035325	Quercus lobata	HOM05D000003	ORTHO05D012891	1.1e-07	59.7	60	38.3
QL05p047572	Quercus lobata	HOM05D000003	ORTHO05D000006	1.1e-07	59.7	62	38.7
CiPaw.05G158600	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.4e-07	59.3	58	37.9
CiPaw.08G080100	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.4e-07	59.3	60	40.0
CiPaw.11G178800	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.4e-07	59.3	58	34.5
QL10p054270	Quercus lobata	HOM05D000003	ORTHO05D000006	1.4e-07	59.3	58	41.4
QL12p026404	Quercus lobata	HOM05D000003	ORTHO05D000004	1.4e-07	59.3	56	44.6
SHI09342	Sapria himalayana	HOM05D000003	ORTHO05D000004	1.4e-07	59.3	57	42.1
CiPaw.12G097200	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.9e-07	58.9	60	35.0
CiPaw.15G041600	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.9e-07	58.9	58	37.9
CiPaw.01G225900	Carya illinoinensis	HOM05D000003	ORTHO05D000006	2.4e-07	58.5	60	35.0
CiPaw.09G205800	Carya illinoinensis	HOM05D000003	ORTHO05D000006	4.1e-07	57.8	53	41.5
CiPaw.01G048000	Carya illinoinensis	HOM05D000003	ORTHO05D000006	5.4e-07	57.4	62	35.5
CiPaw.13G179800	Carya illinoinensis	HOM05D000003	ORTHO05D000006	5.4e-07	57.4	60	38.3
CiPaw.04G070100	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.2e-06	56.2	58	36.2
CiPaw.11G066600	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.2e-06	56.2	62	32.3
CiPaw.13G122400	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.2e-06	56.2	58	34.5
CiPaw.01G208000	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.6e-06	55.8	58	34.5
CiPaw.08G057000	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.6e-06	55.8	60	33.3
CiPaw.12G035100	Carya illinoinensis	HOM05D000003	ORTHO05D000006	1.6e-06	55.8	56	33.9
QL06p033122	Quercus lobata	HOM05D000003	ORTHO05D000006	1.6e-06	55.8	56	44.6
CiPaw.01G094800	Carya illinoinensis	HOM05D000003	ORTHO05D000006	2.0e-06	55.5	57	36.8
CiPaw.05G173100	Carya illinoinensis	HOM05D000003	ORTHO05D000006	2.0e-06	55.5	58	34.5
CiPaw.06G040000	Carya illinoinensis	HOM05D000003	ORTHO05D000006	2.0e-06	55.5	64	39.1
CiPaw.03G000600	Carya illinoinensis	HOM05D000003	ORTHO05D000006	2.7e-06	55.1	60	31.7
Haze_18362	Corylus avellana	HOM05D005002	ORTHO05D006016	2.7e-06	55.1	73	38.4
CiPaw.14G131400	Carya illinoinensis	HOM05D000003	ORTHO05D000006	3.5e-06	54.7	71	35.2
QL07p031183	Quercus lobata	HOM05D000003	ORTHO05D000004	3.5e-06	54.7	57	42.1
QL06p022817	Quercus lobata	HOM05D004997	ORTHO05D005921	4.6e-06	54.3	71	33.8
Hund19901	Selenicereus undatus	HOM05D000003	ORTHO05D000006	4.6e-06	54.3	77	32.5
Hund22684	Selenicereus undatus	HOM05D001165	ORTHO05D000006	4.6e-06	54.3	77	32.5
CiPaw.07G008100	Carya illinoinensis	HOM05D000003	ORTHO05D000006	6.0e-06	53.9	57	33.3
CiPaw.07G216700	Carya illinoinensis	HOM05D013882	ORTHO05D000006	6.0e-06	53.9	44	40.9
CiPaw.09G115400	Carya illinoinensis	HOM05D000003	ORTHO05D000006	7.8e-06	53.5	60	33.3
Haze_08564	Corylus avellana	HOM05D005971	ORTHO05D000006	7.8e-06	53.5	54	42.6
QL01p017079	Quercus lobata	HOM05D001657	ORTHO05D001557	7.8e-06	53.5	57	40.4

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

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