Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002919 Camellia sinensis var. sinensis HOM05D061769 ORTHO05D112610 1.9e-36 155.2 73 100.0
CSS0050015 Camellia sinensis var. sinensis HOM05D061769 ORTHO05D112924 6.8e-10 67.0 38 81.6
CSS0032647 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 3.4e-09 64.7 32 96.9
CSS0050468 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 4.4e-09 64.3 33 90.9
CSS0005568 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 1.7e-08 62.4 33 87.9
CSS0035375 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 3.7e-08 61.2 33 90.9
CSS0008048 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 8.3e-08 60.1 33 84.8
CSS0035391 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 8.3e-08 60.1 33 84.8
Lj2C305T3 Lonicera japonica HOM05D000309 ORTHO05D000271 8.3e-08 60.1 33 87.9
Oeu034145.1 Olea europaea HOM05D000309 ORTHO05D000271 8.3e-08 60.1 33 84.8
Oeu040106.1 Olea europaea HOM05D000309 ORTHO05D000271 8.3e-08 60.1 49 65.3
MSTRG.16245 Avicennia marina HOM05D000309 ORTHO05D000271 1.1e-07 59.7 33 87.9
Lsat_1_v5_gn_7_28400 Lactuca sativa HOM05D000309 ORTHO05D000271 1.1e-07 59.7 33 84.8
Lj2C304T10 Lonicera japonica HOM05D000309 ORTHO05D000271 1.4e-07 59.3 33 84.8
SGA_v2.0_scaffold333G48988 Striga asiatica HOM05D000309 ORTHO05D000271 1.4e-07 59.3 33 84.8
vmacro10961 Vaccinium macrocarpon HOM05D000309 ORTHO05D000271 1.4e-07 59.3 33 87.9
HanXRQChr15g0480841 Helianthus annuus HOM05D000309 ORTHO05D000271 1.9e-07 58.9 33 78.8
Lj2C305T2 Lonicera japonica HOM05D000309 ORTHO05D000271 1.9e-07 58.9 33 81.8
MSTRG.7488 Avicennia marina HOM05D000309 ORTHO05D000271 2.4e-07 58.5 33 84.8
MSTRG.7490 Avicennia marina HOM05D000309 ORTHO05D000271 2.4e-07 58.5 33 84.8
Migut.M00452 Erythranthe guttata HOM05D000309 ORTHO05D000271 2.4e-07 58.5 33 81.8
Migut.M00906 Erythranthe guttata HOM05D000309 ORTHO05D000271 2.4e-07 58.5 33 81.8
Lj1C1189T4 Lonicera japonica HOM05D000309 ORTHO05D000271 4.1e-07 57.8 33 81.8
Dinv32251 Davidia involucrata HOM05D000309 ORTHO05D000271 5.4e-07 57.4 33 84.8
Hma1.2p1_0020F.1_g013940 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 5.4e-07 57.4 33 84.8
Hma1.2p1_0286F.1_g114190 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 5.4e-07 57.4 33 84.8
Actinidia07696 Actinidia chinensis HOM05D000309 ORTHO05D000271 7.0e-07 57.0 33 81.8
Dinv32248 Davidia involucrata HOM05D000309 ORTHO05D000271 7.0e-07 57.0 33 81.8
HanXRQChr04g0117241 Helianthus annuus HOM05D000309 ORTHO05D000271 7.0e-07 57.0 33 84.8
Actinidia07697 Actinidia chinensis HOM05D000309 ORTHO05D000271 1.2e-06 56.2 33 75.8
HanXRQChr04g0114271 Helianthus annuus HOM05D000309 ORTHO05D000271 1.2e-06 56.2 32 81.2
Lsat_1_v5_gn_7_29000 Lactuca sativa HOM05D000309 ORTHO05D000271 1.2e-06 56.2 33 75.8
vmacro07273 Vaccinium macrocarpon HOM05D000309 ORTHO05D000271 1.2e-06 56.2 33 81.8
CSS0005390 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 2.7e-06 55.1 36 72.2
Hma1.2p1_0286F.1_g114000 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 2.7e-06 55.1 35 80.0
SGA_v2.0_scaffold17G08108 Striga asiatica HOM05D000309 ORTHO05D000271 4.6e-06 54.3 33 78.8
ECA236G2534 Erigeron canadensis HOM05D000309 ORTHO05D000271 6.0e-06 53.9 33 75.8
ECA236G0186 Erigeron canadensis HOM05D000309 ORTHO05D000271 7.8e-06 53.5 33 75.8
Hma1.2p1_0286F.1_g114020 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 7.8e-06 53.5 33 81.8
Lsat_1_v5_gn_7_34361 Lactuca sativa HOM05D000309 ORTHO05D000271 7.8e-06 53.5 33 78.8

Acer truncatum (0 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (3 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (9 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (3 genes)
Hydrangea macrophylla (4 genes)
Lactuca sativa (3 genes)
Lonicera japonica (4 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (0 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (0 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (0 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (2 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings