Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Gene Selection
Species Selection

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
CSS0001411	Camellia sinensis var. sinensis	HOM05D001027	ORTHO05D000844	5.1e-20	100.1	51	100.0
CSS0010727	Camellia sinensis var. sinensis	HOM05D001027	ORTHO05D000844	2.2e-15	84.7	80	63.8
Atru.chr7.1631	Acer truncatum	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	27	92.6
Actinidia39707	Actinidia chinensis	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	27	92.6
CSS0030254	Camellia sinensis var. sinensis	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	27	92.6
Cfa003055	Carpinus fangiana	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	36	72.2
Haze_25941	Corylus avellana	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	36	72.2
Dinv42342	Davidia involucrata	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	27	92.6
Hma1.2p1_0672F.1_g200980	Hydrangea macrophylla	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	27	92.6
Potri.006G147400	Populus trichocarpa	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	27	92.6
QL02p062075	Quercus lobata	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	36	72.2
Sabra18G0058800	Salix brachista	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	27	92.6
SabraUnG0005200	Salix brachista	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	27	92.6
TAR624G1250	Trochodendron aralioides	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	27	92.6
GSVIVG01015170001	Vitis vinifera	HOM05D001027	ORTHO05D000844	3.2e-06	54.3	27	92.6
CiPaw.04G147800	Carya illinoinensis	HOM05D001027	ORTHO05D000844	4.2e-06	53.9	36	72.2
Ciclev10009173m.g	Citrus clementina	HOM05D001027	ORTHO05D000844	4.2e-06	53.9	27	92.6
DCAR_010506	Daucus carota	HOM05D001027	ORTHO05D000844	4.2e-06	53.9	27	92.6
ECA234G4183	Erigeron canadensis	HOM05D001027	ORTHO05D000844	4.2e-06	53.9	27	92.6
HanXRQChr10g0319501	Helianthus annuus	HOM05D001027	ORTHO05D000844	4.2e-06	53.9	27	92.6
Lsat_1_v5_gn_5_143181	Lactuca sativa	HOM05D001027	ORTHO05D000844	4.2e-06	53.9	27	92.6
Lj4A291T50	Lonicera japonica	HOM05D001027	ORTHO05D000844	4.2e-06	53.9	27	92.6
PGR142G1838	Punica granatum	HOM05D001027	ORTHO05D000844	4.2e-06	53.9	36	72.2
Rhsim05G0016500	Rhododendron simsii	HOM05D001027	ORTHO05D000844	4.2e-06	53.9	27	92.6
vmacro17140	Vaccinium macrocarpon	HOM05D001027	ORTHO05D000844	4.2e-06	53.9	27	92.6
MSTRG.22565	Avicennia marina	HOM05D001027	ORTHO05D000844	5.4e-06	53.5	36	72.2
Eucgr.C00865	Eucalyptus grandis	HOM05D001027	ORTHO05D000844	5.4e-06	53.5	36	72.2
Actinidia26042	Actinidia chinensis	HOM05D001027	ORTHO05D000844	7.1e-06	53.1	27	88.9
Actinidia39094	Actinidia chinensis	HOM05D001027	ORTHO05D000844	7.1e-06	53.1	27	88.9
Manes.16G099700	Manihot esculenta	HOM05D001027	ORTHO05D000844	7.1e-06	53.1	27	88.9
Oeu055350.2	Olea europaea	HOM05D001027	ORTHO05D000844	7.1e-06	53.1	27	88.9
FvH4_1g07940	Fragaria vesca	HOM05D001027	ORTHO05D000844	9.3e-06	52.8	36	69.4
FAN19G0620	Fragaria x ananassa	HOM05D001027	ORTHO05D000844	9.3e-06	52.8	36	69.4
FAN23G0537	Fragaria x ananassa	HOM05D001027	ORTHO05D000844	9.3e-06	52.8	36	69.4
FAN26G1071	Fragaria x ananassa	HOM05D001027	ORTHO05D000844	9.3e-06	52.8	36	69.4
FAN26G3240	Fragaria x ananassa	HOM05D001027	ORTHO05D000844	9.3e-06	52.8	36	69.4
FAN28G1607	Fragaria x ananassa	HOM05D000250	ORTHO05D000625	9.3e-06	52.8	36	69.4
Prupe.7G205700	Prunus persica	HOM05D001027	ORTHO05D000844	9.3e-06	52.8	36	69.4
RcHm_v2.0_Chr2g0093821	Rosa chinensis	HOM05D001027	ORTHO05D000844	9.3e-06	52.8	36	69.4
SGA_v2.0_scaffold21G09416	Striga asiatica	HOM05D001027	ORTHO05D000844	9.3e-06	52.8	49	55.1
SGA_v2.0_scaffold23G10037	Striga asiatica	HOM05D006688	ORTHO05D008550	9.3e-06	52.8	49	55.1
TWI34G0703	Tripterygium wilfordii	HOM05D001027	ORTHO05D000844	9.3e-06	52.8	27	92.6

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm

Tree construction algorithm

Edit MSA alignment

Interactive Phylogenetics Module

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Data Settings

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