Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0001395 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 1.1e-101 373.2 189 100.0
CSS0033511 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 3.5e-82 308.5 183 86.9
CSS0021579 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 5.7e-77 291.2 183 83.6
CSS0010034 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 3.6e-71 271.9 180 80.0
CSS0048670 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 4.7e-71 271.6 180 80.0
CSS0027428 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 2.1e-58 229.6 170 72.4
CSS0020901 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 5.1e-49 198.4 170 64.7
CSS0034175 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 5.6e-48 194.9 168 66.1
CSS0040684 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 4.2e-35 152.1 139 64.0
CSS0024396 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 3.1e-30 136.0 175 46.9
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 9.6e-16 87.8 180 31.7
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 9.6e-16 87.8 180 31.7
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 3.7e-15 85.9 180 32.2
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 4.8e-15 85.5 180 31.7
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 4.0e-14 82.4 180 32.2
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 6.9e-14 81.6 180 31.1
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 6.9e-14 81.6 171 33.3
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 9.0e-14 81.3 180 30.6
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 3.4e-13 79.3 171 31.6
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 3.4e-13 79.3 175 32.6
vmacro03441 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 2.5e-11 73.2 175 30.9
Hma1.2p1_0148F.1_g066070 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 1.6e-10 70.5 172 29.1
Hma1.2p1_0148F.1_g066080 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 1.6e-10 70.5 172 29.1
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.1e-10 70.1 170 30.6
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-10 70.1 184 30.4
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 2.1e-10 70.1 180 28.9
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 2.7e-10 69.7 172 29.1
Rhsim05G0157800 Rhododendron simsii HOM05D000876 ORTHO05D000285 2.7e-10 69.7 183 32.8
vmacro15102 Vaccinium macrocarpon HOM05D000113 ORTHO05D001798 2.7e-10 69.7 172 30.8
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.6e-10 68.9 168 28.0
FAN02G2707 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.1e-10 68.6 172 30.8
Rhsim06G0093500 Rhododendron simsii HOM05D000876 ORTHO05D000285 7.9e-10 68.2 183 32.2
vmacro00850 Vaccinium macrocarpon HOM05D002121 ORTHO05D004000 7.9e-10 68.2 174 28.2
RcHm_v2.0_Chr2g0128681 Rosa chinensis HOM05D000876 ORTHO05D000285 1.3e-09 67.4 173 28.9
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.8e-09 67.0 171 30.4
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.8e-09 67.0 171 30.4
RcHm_v2.0_Chr2g0103961 Rosa chinensis HOM05D000876 ORTHO05D000285 1.8e-09 67.0 167 29.3
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 3.0e-09 66.2 175 29.7
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 3.0e-09 66.2 175 29.7
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 3.0e-09 66.2 177 31.1
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 3.0e-09 66.2 176 32.4
Hund26462 Selenicereus undatus HOM05D000876 ORTHO05D002662 3.0e-09 66.2 201 31.3
FAN05G0722 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.1e-09 65.5 172 28.5
FAN17G2734 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.1e-09 65.5 176 28.4
FAN23G0201 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.1e-09 65.5 172 30.8
FAN23G2351 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.1e-09 65.5 172 30.8
Actinidia38818 Actinidia chinensis HOM05D000876 ORTHO05D000285 6.7e-09 65.1 175 27.4
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.7e-09 65.1 172 30.2
QL03p014458 Quercus lobata HOM05D000876 ORTHO05D000285 6.7e-09 65.1 181 28.7
QL06p033300 Quercus lobata HOM05D000876 ORTHO05D000285 6.7e-09 65.1 181 28.7
QL08p029247 Quercus lobata HOM05D013302 ORTHO05D015047 6.7e-09 65.1 173 32.9
Actinidia04386 Actinidia chinensis HOM05D000876 ORTHO05D000285 1.1e-08 64.3 178 28.7
Actinidia07377 Actinidia chinensis HOM05D000876 ORTHO05D000285 1.1e-08 64.3 178 28.7
Actinidia15148 Actinidia chinensis HOM05D000876 ORTHO05D000285 1.1e-08 64.3 178 28.7
QL01p041709 Quercus lobata HOM05D000876 ORTHO05D000285 1.1e-08 64.3 181 28.2
FAN07G1275 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.5e-08 63.9 175 29.1
arahy.Tifrunner.gnm1.ann1.D3784E Arachis hypogaea HOM05D000034 ORTHO05D000037 2.5e-08 63.2 172 27.9
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 2.5e-08 63.2 173 32.9
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.3e-08 62.8 175 29.1
FAN02G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.3e-08 62.4 172 29.1
FvH4_2g31320 Fragaria vesca HOM05D000876 ORTHO05D022651 7.4e-08 61.6 163 30.1
Nitab4.5_0028034g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 7.4e-08 61.6 160 29.4
Actinidia36308 Actinidia chinensis HOM05D000876 ORTHO05D000285 9.7e-08 61.2 117 31.6
FvH4_1g28413 Fragaria vesca HOM05D000876 ORTHO05D015047 9.7e-08 61.2 165 27.3
FAN14G5489 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.7e-08 61.2 160 26.9
Peaxi162Scf00174g00006 Petunia axillaris HOM05D007579 ORTHO05D000285 9.7e-08 61.2 128 32.0
Ah.03g141330 Amaranthus hybridus HOM05D000876 ORTHO05D000285 1.3e-07 60.8 180 27.2
FAN09G3353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-07 60.8 166 27.7
TAR636G1415 Trochodendron aralioides HOM05D011286 ORTHO05D000285 1.3e-07 60.8 184 25.0
Atru.chr3.1562 Acer truncatum HOM05D000876 ORTHO05D000285 1.6e-07 60.5 183 25.1
Atru.chr3.1584 Acer truncatum HOM05D000876 ORTHO05D000285 1.6e-07 60.5 183 25.1
Ah.10g031690 Amaranthus hybridus HOM05D000034 ORTHO05D000285 1.6e-07 60.5 178 27.5
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.6e-07 60.5 172 27.9
QL08p009302 Quercus lobata HOM05D000876 ORTHO05D000285 1.6e-07 60.5 181 29.3
arahy.Tifrunner.gnm1.ann1.X5RLQI Arachis hypogaea HOM05D000034 ORTHO05D000285 2.2e-07 60.1 104 30.8
Ah.01g014380 Amaranthus hybridus HOM05D000876 ORTHO05D002662 2.8e-07 59.7 178 28.1
FAN21G1280 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.8e-07 59.7 165 26.7
Hma1.2p1_1123F.1_g259380 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 2.8e-07 59.7 172 28.5
Peaxi162Scf00002g02220 Petunia axillaris HOM05D000876 ORTHO05D000285 2.8e-07 59.7 149 30.9
arahy.Tifrunner.gnm1.ann1.T11VTH Arachis hypogaea HOM05D000034 ORTHO05D000037 3.7e-07 59.3 152 30.3
FAN11G2465 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.7e-07 59.3 159 29.6
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 3.7e-07 59.3 183 29.0
TAR629G0381 Trochodendron aralioides HOM05D011286 ORTHO05D000285 4.8e-07 58.9 180 25.0
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 6.3e-07 58.5 180 27.2
Actinidia40454 Actinidia chinensis HOM05D000876 ORTHO05D000285 6.3e-07 58.5 108 31.5
Potri.003G006700 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.3e-07 58.5 180 29.4
Potri.010G132850 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.3e-07 58.5 180 29.4
Potri.017G062600 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.3e-07 58.5 166 30.7
FAN08G0806 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-06 57.8 157 32.5
TAR624G0658 Trochodendron aralioides HOM05D011286 ORTHO05D000285 1.1e-06 57.8 184 25.0
FvH4_7g00070 Fragaria vesca HOM05D000876 ORTHO05D000285 1.8e-06 57.0 162 30.2
FAN22G0382 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.8e-06 57.0 157 29.3
Glyma.02G166900 Glycine max HOM05D000876 ORTHO05D000285 1.8e-06 57.0 170 30.6
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 2.4e-06 56.6 175 24.6
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 2.4e-06 56.6 163 26.4
Glyma.18G094800 Glycine max HOM05D000876 ORTHO05D000285 2.4e-06 56.6 176 29.5
Glyma.19G101700 Glycine max HOM05D000876 ORTHO05D000285 2.4e-06 56.6 173 29.5
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 3.1e-06 56.2 100 33.0
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 3.1e-06 56.2 161 25.5
DCAR_026451 Daucus carota HOM05D000876 ORTHO05D000285 4.1e-06 55.8 186 26.3
SGA_v2.0_scaffold136G35048 Striga asiatica HOM05D045704 ORTHO05D000285 4.1e-06 55.8 186 26.3
arahy.Tifrunner.gnm1.ann1.GG5U8X Arachis hypogaea HOM05D000876 ORTHO05D000285 5.3e-06 55.5 163 25.8
FvH4_6g53022 Fragaria vesca HOM05D000876 ORTHO05D000285 6.9e-06 55.1 171 29.2
Potri.014G026000 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.9e-06 55.1 180 28.9
Potri.014G061450 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.9e-06 55.1 182 25.3

Acer truncatum (3 genes)
Actinidia chinensis (6 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (3 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (8 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (10 genes)
Cannabis sativa (7 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (9 genes)
Fragaria x ananassa (20 genes)
Glycine max (3 genes)
Gossypium hirsutum (0 genes)
Gossypium raimondii (0 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (0 genes)
Nicotiana tabacum (1 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (5 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (2 genes)
Punica granatum (0 genes)
Quercus lobata (7 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (3 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (3 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings