Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000361 Camellia sinensis var. sinensis HOM05D000421 ORTHO05D012543 3.2e-26 120.9 58 100.0
CSS0007855 Camellia sinensis var. sinensis HOM05D000421 ORTHO05D012543 6.6e-24 113.2 57 96.5
CSS0050332 Camellia sinensis var. sinensis HOM05D000421 ORTHO05D012543 7.0e-18 93.2 60 80.0
CSS0000418 Camellia sinensis var. sinensis HOM05D000421 ORTHO05D001007 5.6e-15 83.6 44 88.6
Rhsim05G0116300 Rhododendron simsii HOM05D000421 ORTHO05D001007 1.2e-12 75.9 44 77.3
vmacro19837 Vaccinium macrocarpon HOM05D000421 ORTHO05D001007 9.8e-12 72.8 44 75.0
Actinidia00155 Actinidia chinensis HOM05D000421 ORTHO05D001007 3.2e-10 67.8 51 62.7
Actinidia26188 Actinidia chinensis HOM05D000421 ORTHO05D001007 9.2e-10 66.2 44 70.5
Thecc.02G012700 Theobroma cacao HOM05D000421 ORTHO05D001007 3.5e-09 64.3 42 69.0
Dinv29669 Davidia involucrata HOM05D000421 ORTHO05D012543 1.0e-08 62.8 37 75.7
Duzib052G0429 Durio zibethinus HOM05D000421 ORTHO05D001007 1.0e-08 62.8 51 56.9
COL.COLO4_17686 Corchorus olitorius HOM05D000421 ORTHO05D001007 2.3e-08 61.6 51 58.8
Duzib248G1382 Durio zibethinus HOM05D000421 ORTHO05D001007 2.3e-08 61.6 50 58.0
THA.LOC104809032 Tarenaya hassleriana HOM05D000421 ORTHO05D001007 2.3e-08 61.6 50 58.0
RcHm_v2.0_Chr7g0220251 Rosa chinensis HOM05D000421 ORTHO05D001007 5.1e-08 60.5 46 58.7
Ciclev10001347m.g Citrus clementina HOM05D000421 ORTHO05D001007 6.6e-08 60.1 42 64.3
Gohir.A04G134300 Gossypium hirsutum HOM05D000421 ORTHO05D001007 6.6e-08 60.1 42 61.9
Gohir.D04G177500 Gossypium hirsutum HOM05D000421 ORTHO05D001007 6.6e-08 60.1 42 61.9
Gorai.012G170400 Gossypium raimondii HOM05D000421 ORTHO05D001007 6.6e-08 60.1 42 61.9
Prupe.1G583200 Prunus persica HOM05D000421 ORTHO05D001007 6.6e-08 60.1 42 61.9
Atru.chr6.352 Acer truncatum HOM05D000421 ORTHO05D001007 1.1e-07 59.3 42 64.3
Atru.chr6.401 Acer truncatum HOM05D000421 ORTHO05D001007 1.1e-07 59.3 42 64.3
MD15G1440900 Malus domestica HOM05D000421 ORTHO05D001007 1.5e-07 58.9 46 56.5
Cpa.g.sc113.3 Carica papaya HOM05D000421 ORTHO05D001007 1.9e-07 58.5 42 64.3
CANSAT01G0797 Cannabis sativa HOM05D000421 ORTHO05D001007 4.3e-07 57.4 41 63.4
MD08G1245700 Malus domestica HOM05D000421 ORTHO05D001007 4.3e-07 57.4 46 56.5
GSVIVG01023201001 Vitis vinifera HOM05D000421 ORTHO05D001007 4.3e-07 57.4 41 61.0
Hma1.2p1_0052F.1_g029910 Hydrangea macrophylla HOM05D000421 ORTHO05D001007 7.3e-07 56.6 56 48.2
TWI23G0288 Tripterygium wilfordii HOM05D000421 ORTHO05D001007 7.3e-07 56.6 44 52.3
Manes.10G110400 Manihot esculenta HOM05D000421 ORTHO05D001007 9.5e-07 56.2 43 62.8
Nn1g08745 Nelumbo nucifera HOM05D000074 ORTHO05D001793 9.5e-07 56.2 51 47.1
EL10Ac6g14015 Beta vulgaris HOM05D000421 ORTHO05D001007 2.1e-06 55.1 36 66.7
Dinv06975 Davidia involucrata HOM05D000421 ORTHO05D001007 2.1e-06 55.1 51 47.1
PGR142G0493 Punica granatum HOM05D000421 ORTHO05D001007 2.1e-06 55.1 41 58.5
Nn1g09789 Nelumbo nucifera HOM05D000421 ORTHO05D001007 2.8e-06 54.7 51 45.1
Nitab4.5_0001653g0070 Nicotiana tabacum HOM05D000421 ORTHO05D001007 2.8e-06 54.7 51 51.0
Potri.019G053000 Populus trichocarpa HOM05D000421 ORTHO05D001007 3.6e-06 54.3 44 52.3
AUR62029917 Chenopodium quinoa HOM05D000421 ORTHO05D001007 8.1e-06 53.1 57 45.6
AUR62033788 Chenopodium quinoa HOM05D000421 ORTHO05D001007 8.1e-06 53.1 57 45.6

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (0 genes)
Arabidopsis thaliana (0 genes)
Arachis hypogaea (0 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (0 genes)
Brassica rapa (0 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (0 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (0 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (0 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (0 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (0 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (0 genes)
Lonicera japonica (0 genes)
Lotus japonicus (0 genes)
Lupinus albus (0 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (1 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (0 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (0 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (0 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (0 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

Program Settings