Gene: AT3G62120

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G62120
  • Transcript Identifier AT3G62120.3
  • Gene Type Coding gene
  • Location Chr3 : 23001227-23003849 : negative

Gene Family Information

  • ID HOM05D001410
  • #Genes/#Species 445/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G62120.3
  • uniprot Q9M1R2

Descriptions

  • Description Class II aaRS and biotin synthetases superfamily protein
  • Computational description Class II aaRS and biotin synthetases superfamily protein; FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: prolyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT5G52520.1); Has 9240 Blast hits to 8990 proteins in 2633 species: Archae - 270; Bacteria - 6522; Metazoa - 295; Fungi - 194; Plants - 105; Viruses - 0; Other Eukaryotes - 1854 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006433
IBA
IEA
Gene Ontologyprolyl-tRNA aminoacylation1
GO:0006433
IEA
InterProprolyl-tRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004827
IDA
IBA
IEA
Gene Ontologyproline-tRNA ligase activity1 2
GO:0004827
IEA
InterProproline-tRNA ligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3
GO:0005737
ISM, IBA
IEA
Gene Ontologycytoplasm1
GO:0005737
IEA
InterProcytoplasm
GO:0005829
IDA
IEA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol4
GO:0017101
IBA
Gene Ontologyaminoacyl-tRNA synthetase multienzyme complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016061 Proline-tRNA ligase, class II, C-terminal
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR033721 Prolyl-tRNA synthetase, catalytic domain
IPR002316 Proline-tRNA ligase, class IIa
IPR004499 Proline-tRNA ligase, class IIa, archaeal-type
IPR017449 Prolyl-tRNA synthetase, class II
IPR004154 Anticodon-binding
IPR036621 Anticodon-binding domain superfamily
Mapman id Description
17.2.17 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase