Gene: Zm00001eb241370

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb241370
  • Transcript Identifier Zm00001eb241370_T001
  • Gene Type Coding gene
  • Location 5 : 165896871-165900899 : positive

Gene Family Information

  • ID HOM05D000622
  • #Genes/#Species 916/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb241370_T001
  • pid Zm00001eb241370_P001
  • uniprot B4FJT7
  • uniprot A0A3L6EUM8
  • uniprot B6ST52
  • entrez 100216804
  • refseq NP_001136675.1
  • refseq NM_001143203.2
  • V4_identifier Zm00001d016528

Descriptions

  • Description Zm00001e014590
  • Description Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G60980
GO:0090332
ISO
PLAZA Integrative Orthologystomatal closure AT5G48650
GO:1900425
ISO
PLAZA Integrative Orthologynegative regulation of defense response to bacterium AT5G48650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G60980

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990904
IBA
GOA Databaseribonucleoprotein complex
GO:0005829
IBA
GOA Databasecytosol
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G60980
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G07250
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G48650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR018222 Nuclear transport factor 2, eukaryote
IPR002075 Nuclear transport factor 2
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR039539 Ras GTPase-activating protein-binding protein
IPR032710 NTF2-like domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.8.1 RNA processing.mRNA sequestration.mRNA endoribonuclease (G3BP)