Gene: TAR627G0580
General Information
Structural Information
- Species Trochodendron aralioides
- Gene Identifier TAR627G0580
- Transcript Identifier TAR627G0580.1
- Gene Type Coding gene
- Location group6 : 27214838-27248817 : negative
Gene Family Information
- ID HOM05D004256
- #Genes/#Species 167/93
- Phylogenetic origin
- ID ORTHO05D005224
- #Genes/#Species 162/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id evm.TU.group6.393
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009616 | ISO | PLAZA Integrative Orthology | RNAi-mediated antiviral immune response | AT4G20910 |
| GO:0010093 | ISO | PLAZA Integrative Orthology | specification of floral organ identity | AT4G20910 |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT4G20910 |
| GO:0035196 | ISO | PLAZA Integrative Orthology | production of miRNAs involved in gene silencing by miRNA | AT4G20910 |
| GO:0010589 | ISO | PLAZA Integrative Orthology | leaf proximal/distal pattern formation | AT4G20910 |
| GO:0061715 | ISO | PLAZA Integrative Orthology | miRNA 2'-O-methylation | AT4G20910 |
| GO:0010305 | ISO | PLAZA Integrative Orthology | leaf vascular tissue pattern formation | AT4G20910 |
| GO:0035279 | ISO | PLAZA Integrative Orthology | mRNA cleavage involved in gene silencing by miRNA | AT4G20910 |
| GO:0030422 | ISO | PLAZA Integrative Orthology | production of siRNA involved in RNA interference | AT4G20910 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008168 | IEA | InterPro | methyltransferase activity | |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0008173 | ISO | PLAZA Integrative Orthology | RNA methyltransferase activity | AT4G20910 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G20910 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G20910 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR040870 | HEN1, double-stranded RNA binding domain 2 |
| IPR014720 | Double-stranded RNA-binding domain |
| IPR040813 | Small RNA 2'-O-methyltransferase Hen1, La-motif C-terminal domain |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR013216 | Methyltransferase type 11 |
| IPR001179 | FKBP-type peptidyl-prolyl cis-trans isomerase domain |
| Mapman id | Description |
|---|---|
| 16.9.3 | RNA processing.mRNA silencing.miRNA/siRNA methyltransferase (HEN1) |