Gene: Sp5g04970

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp5g04970
  • Transcript Identifier Sp5g04970.1
  • Gene Type Coding gene
  • Location ch5-1 : 1812580-1820642 : negative

Gene Family Information

  • ID HOM05D000228
  • #Genes/#Species 1809/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp5g04970.v2.2
  • pacid 45075838

Descriptions

  • Description K02999 - DNA-directed RNA polymerase I subunit RPA1 (RPA1, POLR1A)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G57660
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G57660

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006592 RNA polymerase, N-terminal
IPR007066 RNA polymerase Rpb1, domain 3
IPR007081 RNA polymerase Rpb1, domain 5
IPR015699 DNA-directed RNA pol I, largest subunit
IPR042102 RNA polymerase Rpb1, domain 3 superfamily
IPR000722 RNA polymerase, alpha subunit
IPR044893 RNA polymerase Rpb1, clamp domain superfamily
IPR007080 RNA polymerase Rpb1, domain 1
IPR007083 RNA polymerase Rpb1, domain 4
IPR038120 RNA polymerase Rpb1, funnel domain superfamily
Mapman id Description
15.1.1.1 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic components.subunit 1