Gene: Sopen12g032080

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g032080
  • Transcript Identifier Sopen12g032080.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 81087423-81088911 : positive

Gene Family Information

  • ID HOM05D001080
  • #Genes/#Species 568/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g032080.1

Descriptions

  • Description Ribosomal protein L30/L7 family protein | FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity | INVOLVED IN: translation | LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit, membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal , Ribosomal protein L7, eukaryotic , Ribosomal protein L30p/L7e, conserved region , Ribosomal protein L30, conserved site , Ribosomal protein L30, ferredoxin-like fold domain | BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000463
IEA
InterPromaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G44120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022625
IEA
InterProcytosolic large ribosomal subunit
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G01250
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G01250
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G01250
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G01250
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G01250
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G01250
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G01250
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G01250

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039699 Ribosomal protein L7/L30
IPR012988 Ribosomal protein L30, N-terminal
IPR016082 Ribosomal protein L30, ferredoxin-like fold domain
IPR035808 Ribosomal protein L7, eukaryotic/archaeal
IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily
IPR005998 Ribosomal protein L7, eukaryotic
Mapman id Description
17.1.2.1.5 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL7