Gene: Sopen12g032090

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g032090
  • Transcript Identifier Sopen12g032090.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 81118254-81122046 : positive

Gene Family Information

  • ID HOM05D007105
  • #Genes/#Species 112/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g032090.1

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 | BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002098
ISO
PLAZA Integrative OrthologytRNA wobble uridine modification AT1G31600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
IPR035979 RNA-binding domain superfamily
IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated