Gene: AT2G01250

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G01250
  • Transcript Identifier AT2G01250.1
  • Gene Type Coding gene
  • Location Chr2 : 132943-134264 : negative

Gene Family Information

  • ID HOM05D001080
  • #Genes/#Species 568/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G01250.1
  • uniprot P60040

Descriptions

  • Description Ribosomal protein L30/L7 family protein
  • Computational description Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, conserved site (InterPro:IPR018038), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1297 Blast hits to 1295 proteins in 388 species: Archae - 210; Bacteria - 1; Metazoa - 453; Fungi - 213; Plants - 195; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000463
IEA
GOA Databasematuration of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463
IBA
Gene Ontologymaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1
GO:0000463
IEA
InterPromaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IBA
Gene OntologyRNA binding1
GO:0003729
IDA, HDA
Gene OntologymRNA binding2 3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022625
IDA
IEA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
Gene Ontologycytosolic large ribosomal subunit1 4
GO:0022625
IEA
InterProcytosolic large ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005829
IDA
GOA Databasecytosol
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome5
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast6
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005773
IDA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole7
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005618
IDA
GOA Databasecell wall
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005739
HDA
Gene Ontologymitochondrion8
GO:0005794
RCA
Gene OntologyGolgi apparatus9
GO:0000325
HDA
Gene Ontologyplant-type vacuole10
GO:0009505
HDA
Gene Ontologyplant-type cell wall11

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005998 Ribosomal protein L7, eukaryotic
IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily
IPR035808 Ribosomal protein L7, eukaryotic/archaeal
IPR016082 Ribosomal protein L30, ferredoxin-like fold domain
IPR039699 Ribosomal protein L7/L30
IPR012988 Ribosomal protein L30, N-terminal
Mapman id Description
17.1.2.1.5 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL7