Gene: Sopen11g025920

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g025920
  • Transcript Identifier Sopen11g025920.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 61589589-61593555 : positive

Gene Family Information

  • ID HOM05D000739
  • #Genes/#Species 792/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g025920.1

Descriptions

  • Description encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. | UDP-XYL synthase 5 (UXS5) | FUNCTIONS IN: UDP-glucuronate decarboxylase activity, catalytic activity | INVOLVED IN: nucleotide-sugar metabolic process, D-xylose metabolic process | LOCATED IN: chloroplast | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase , NAD(P)-binding domain | BEST Arabidopsis thaliana protein match is: UDP-glucuronic acid decarboxylase 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042732
IEA
InterProD-xylose metabolic process
GO:0045492
ISO
PLAZA Integrative Orthologyxylan biosynthetic process AT3G46440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048040
IEA
InterProUDP-glucuronate decarboxylase activity
GO:0070403
IEA
InterProNAD+ binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G46440
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G46440
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G28760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044516 UDP-glucuronic acid decarboxylase
IPR016040 NAD(P)-binding domain
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
3.13.5.1 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-xylose biosynthesis.UDP-D-glucuronic acid decarboxylase