Gene: Sopen11g025930

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g025930
  • Transcript Identifier Sopen11g025930.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 61597249-61597560 : positive

Gene Family Information

  • ID HOM05D000283
  • #Genes/#Species 1540/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g025930.1

Descriptions

  • Description Histone superfamily protein | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: vacuole | CONTAINS InterPro DOMAIN/s: Histone H4, conserved site , Histone-fold , Histone core , Histone H4 | BEST Arabidopsis thaliana protein match is: Histone superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G07660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G59970

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G07660
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G07660
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G07660
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G07660
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G07660
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G07660
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G07660
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT1G07660

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035425 CENP-T/Histone H4, histone fold
IPR001951 Histone H4
IPR009072 Histone-fold
Mapman id Description
12.1.1.4 Chromatin organisation.chromatin structure.DNA wrapping.histone (H4)